Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_D15
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   4.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   4.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
 Frame = +2

Query: 473 TELKKEA--TLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLAATQALLN 646
           T+L +EA  T + I  I  DID E   ER+  I +A+       E +     +   ALL 
Sbjct: 311 TDLCQEANSTKKLIVKIKIDIDKE--DERNEVISSALKLSQNELEITACKFFSIDNALLF 368

Query: 647 SLEFT-------RANFEKENERNFIMEVVCEATQS 730
           S   T       R + +KE+ERN I+    + +QS
Sbjct: 369 SANSTKKLIVKIRIDIDKEDERNEIISSALKLSQS 403


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 453 FSTRIGIRSFHCPTGSSATATYATHCAAELGRLFSV 346
           FS + GI+   C T  SAT  +      E+ R F++
Sbjct: 150 FSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTI 185


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 453 FSTRIGIRSFHCPTGSSATATYATHCAAELGRLFSV 346
           FS + GI+   C T  SAT  +      E+ R F++
Sbjct: 146 FSYKCGIQYHICNTVISATVCFMMLLMLEIWRRFTI 181


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 81  HLIEMNWKQQLDTSTMLPPQISQHSSKCCPMSFS 182
           H  ++N  QQ     M   ++S   ++C P+S S
Sbjct: 307 HSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLS 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,874
Number of Sequences: 336
Number of extensions: 3924
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)