Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D14
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372... 185 3e-47
06_03_1062 - 27293119-27293313,27293390-27293548,27293877-272941... 182 4e-46
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 181 7e-46
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 106 2e-23
10_08_0167 - 15370890-15371093,15371588-15371686,15371912-153719... 42 6e-04
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 30 2.6
07_03_1378 + 26158233-26158562,26159075-26159176,26159551-261598... 29 5.9
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 29 5.9
>02_01_0516 +
3727742-3727936,3729115-3729192,3729292-3729552,
3729921-3730238,3730527-3730685,3730768-3730961,
3731644-3731647
Length = 402
Score = 185 bits (451), Expect = 3e-47
Identities = 107/230 (46%), Positives = 143/230 (62%), Gaps = 3/230 (1%)
Frame = +3
Query: 144 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 320
+L GK+V +R D NVPL + IT++ RI A++ +VK+ L+KGAK V+L SHLGRP G V
Sbjct: 14 DLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAK-VILASHLGRPKG-V 71
Query: 321 NLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEGXG 500
KY+LKP+ L +LL DV NDCIG EVE A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLENVRFYKEEE--- 128
Query: 501 VDASGAKVKADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLL 674
K DPE F L + D+Y+NDAFGTAHRAH+S G + + +GFL+
Sbjct: 129 --------KNDPE----FAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLM 176
Query: 675 KKELQYFAKALHEPERPFLAILGGAKVXXKXXXXXXXXDKVNEMIIGGGM 824
+KEL Y A+ P++PF AI+GG+KV K KV+ +I+GGGM
Sbjct: 177 QKELDYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGM 226
>06_03_1062 -
27293119-27293313,27293390-27293548,27293877-27294194,
27294535-27294795,27294901-27294978,27295707-27295901
Length = 401
Score = 182 bits (442), Expect = 4e-46
Identities = 104/230 (45%), Positives = 141/230 (61%), Gaps = 3/230 (1%)
Frame = +3
Query: 144 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 320
+L GK+V +R D NVPL + IT++ RI A++ ++K+ + KGAK V+L SHLGRP G V
Sbjct: 14 DLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAK-VILASHLGRPKG-V 71
Query: 321 NLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEGXG 500
KY+LKP+ L +LL DV NDCIG EV+ A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLENVRFYKEEE--- 128
Query: 501 VDASGAKVKADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLL 674
K DPE F L + D+Y+NDAFGTAHRAH+S G + +GFL+
Sbjct: 129 --------KNDPE----FANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLM 176
Query: 675 KKELQYFAKALHEPERPFLAILGGAKVXXKXXXXXXXXDKVNEMIIGGGM 824
+KEL Y A+ P++PF AI+GG+KV K KV+ +I+GGGM
Sbjct: 177 QKELDYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDILILGGGM 226
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 181 bits (440), Expect = 7e-46
Identities = 109/258 (42%), Positives = 152/258 (58%), Gaps = 4/258 (1%)
Frame = +3
Query: 63 RQKASKNQKEFNFLLRMALNKLX-IDALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAA 236
RQ AS + + + MA + + A +L GKRV +R D NVPL + IT++ R+ AA
Sbjct: 64 RQAASSSSRGTRAVATMAKKSVGDLTAADLEGKRVFVRADLNVPLDDNQNITDDTRVRAA 123
Query: 237 LDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEV 416
+ +++Y + GAK V+L SHLGRP G V K++L P+ L +LL VT D IGP+V
Sbjct: 124 IPTIQYLIKNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVTKAEDVIGPDV 181
Query: 417 ETACANPSAGSIILLENLRFHIEEEGXGVDASGAKVKADPEKVKAFRASLRKLGDVYIND 596
E + GS++LLEN+RF+ EEE K DPE F L L D+Y+ND
Sbjct: 182 EKLVSELPNGSVLLLENVRFYKEEE-----------KNDPE----FAKKLASLADLYVND 226
Query: 597 AFGTAHRAHSSMVG--EGFEQRASGFLLKKELQYFAKALHEPERPFLAILGGAKVXXKXX 770
AFGTAHRAH+S G + + +GFLL+KEL Y A+ P+RPF AI+GG+KV K
Sbjct: 227 AFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIG 286
Query: 771 XXXXXXDKVNEMIIGGGM 824
+K + +++GGGM
Sbjct: 287 VIESLLEKCDILLLGGGM 304
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 106 bits (254), Expect = 2e-23
Identities = 70/169 (41%), Positives = 100/169 (59%), Gaps = 2/169 (1%)
Frame = +3
Query: 138 ALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDG 314
A +L GKRVL+R D NVPL IT++ R++AA+ ++K+ + GAK V+L SHLGRP G
Sbjct: 11 AADLEGKRVLLRADLNVPLDASQNITDDTRVIAAIPTIKHLIGNGAK-VILCSHLGRPKG 69
Query: 315 QVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRFHIEEEG 494
+ K++L P+ L +LL V +D IGPEVE + + GS++LLEN+RF+ EEE
Sbjct: 70 -ITPKFSLAPLVPRLSELLGIQVQKADDVIGPEVEKSVSVLPNGSVLLLENVRFYKEEE- 127
Query: 495 XGVDASGAKVKADPEKVKAFRASLRKLGDV-YINDAFGTAHRAHSSMVG 638
K DPE K ASL L ++ Y+ A R +++VG
Sbjct: 128 ----------KNDPEFAKKL-ASLADLYELDYLVGAVSNPKRPFAAIVG 165
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 681 ELQYFAKALHEPERPFLAILGGAKVXXKXXXXXXXXDKVNEMIIGGGM 824
EL Y A+ P+RPF AI+GG+KV K +K + +++GGGM
Sbjct: 145 ELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGM 192
>10_08_0167 -
15370890-15371093,15371588-15371686,15371912-15371996,
15372570-15372619,15372688-15372764,15373282-15373357,
15374103-15374354,15374864-15374931,15375172-15375463,
15376553-15376896,15377517-15377793,15378440-15378506,
15378848-15378900
Length = 647
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 525 KADPEKVKAFRASLRKLGDVYINDAFGTAHRAHSSMVGEGFEQRAS--GFLLKKELQYFA 698
K + F L +++ND+F +H+ +S VG AS GF ++EL
Sbjct: 175 KGENANCNDFSQKLASGAAIFVNDSFSLSHKMLASTVGITRFCHASLAGFHFEEELMQLR 234
Query: 699 KALHEPERPFLAILGGAKVXXK 764
K RPF+AI+GG+ K
Sbjct: 235 KITDTTRRPFIAIIGGSNFLGK 256
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 249 KYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCI 404
+Y + V M+H + ++ L +AEE KKLL KD T + +
Sbjct: 687 RYITSSVKSAFVKMAHSVEAKADTSHEHVLASLAEETKKLLKKDTTVFSSVL 738
>07_03_1378 +
26158233-26158562,26159075-26159176,26159551-26159850,
26160006-26160068
Length = 264
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 664 PLALCSKPSPTIELCALCAVPKASLI*TSPSFLKLALKALTFSGSA 527
P C KP+P C CA+P + + P+ L+ L + + S+
Sbjct: 16 PAVPCPKPAPPASACFPCALPPRAALAAPPAPLRRRLSPVAVAVSS 61
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 354 ELKKLLNKDVTFLNDCIGPEVETACANPSAGSIILLENLRF 476
EL+K+LN+D++ L +G +T G I+L+ +LR+
Sbjct: 92 ELEKMLNQDLSRLYPELGNFFQTTICQSMLGRILLVWSLRY 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,464,894
Number of Sequences: 37544
Number of extensions: 365873
Number of successful extensions: 865
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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