Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D10
(758 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 352 5e-96
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 321 1e-86
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 181 1e-84
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 272 5e-72
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 220 3e-56
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 215 1e-54
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 202 1e-50
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 194 2e-48
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 190 4e-47
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 162 7e-39
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 158 1e-37
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 158 2e-37
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 102 1e-20
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 97 3e-19
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 57 5e-18
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 85 2e-15
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 79 2e-13
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 74 4e-12
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 46 5e-10
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 3e-09
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 49 1e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 47 4e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 34 0.002
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 45 0.002
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 43 0.009
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 41 0.038
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 31 0.29
UniRef50_Q7QQ87 Cluster: GLP_42_9619_116; n=1; Giardia lamblia A... 33 5.8
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 352 bits (866), Expect = 5e-96
Identities = 162/229 (70%), Positives = 185/229 (80%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+GFVKVV +KQ FKR QVKF+RRR G T YARKRL Q K+KYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 432 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 611
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 612 PGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKL 758
PGY AE+K FNA+VHRAHIFG HVA+YM SLE++DE+SFKRQF +YIKL
Sbjct: 181 PGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKL 229
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 321 bits (788), Expect = 1e-86
Identities = 147/228 (64%), Positives = 176/228 (77%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+GFVKVV +K FKR QVKF+RRR G T YARKRLV+Q K+KYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 432 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 611
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 612 PGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
PGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 181 bits (440), Expect(2) = 1e-84
Identities = 81/101 (80%), Positives = 89/101 (88%)
Frame = +3
Query: 456 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 635
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 636 KFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKL 758
FNAE HRAHIFG HVA+YM +LE +D ++FKRQF +YIKL
Sbjct: 158 TFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKL 198
Score = 156 bits (378), Expect(2) = 1e-84
Identities = 71/89 (79%), Positives = 79/89 (88%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+GFVKVV +KQ FKR QVKFKRRR G T YARKRL+VQ K+KYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 338
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 272 bits (668), Expect = 5e-72
Identities = 128/227 (56%), Positives = 159/227 (70%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+G VKV+ +K FKR QVK +RRR G T YARKRL VQ K+KYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 432 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 611
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 612 PGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYI 752
G+D ESK++NAE HR I G HVA+YM L+++DED +KRQF K++
Sbjct: 180 FGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFL 226
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 220 bits (537), Expect = 3e-56
Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Frame = +3
Query: 114 RSQVKFKRRRAGX--TXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 287
R QVKF RRR G T AR+RL+ Q K+KYN+PKYR +VR +N+DV CQV Y+ + GD
Sbjct: 22 RYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGD 81
Query: 288 HIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV 467
+CAAYSHELP+YG+K GLTNYAA Y+TG +Y+V
Sbjct: 82 VTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHV 141
Query: 468 EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA 647
E D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GYD + K +
Sbjct: 142 EQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDP 201
Query: 648 EVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYI 752
+ +I G VAEY +++++ + F++ F KY+
Sbjct: 202 DTLERYIKGGVVAEYAEEMQEEEPEKFEQHFAKYL 236
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 215 bits (524), Expect = 1e-54
Identities = 108/234 (46%), Positives = 146/234 (62%), Gaps = 9/234 (3%)
Frame = +3
Query: 78 FVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTC 257
FVKVV +K FKR QVK++RRR G T +AR+++V+Q K K+ +PKYRL+VR++NKD+
Sbjct: 26 FVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIA 85
Query: 258 QVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXX 437
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 86 QIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGA 145
Query: 438 XXXXXXEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 599
V + G F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH
Sbjct: 146 KEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHR 205
Query: 600 IKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQD---DEDSFKRQFXKYI 752
RFPGY+ E +A+VHR IFG HVA+Y+ ++++ + D QF KY+
Sbjct: 206 PNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEEASSNPDEKCVQFSKYM 259
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 202 bits (492), Expect = 1e-50
Identities = 105/231 (45%), Positives = 135/231 (58%), Gaps = 3/231 (1%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+ +VKVV +K FKR QVK++RRR G T ARK L++Q K+KYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 422
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 423 XXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 602
E + + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 603 KRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
RFPG +FN E R +I G+HVAEYM S++++D D +K F Y+K
Sbjct: 181 NRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKAHFNDYLK 228
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 194 bits (473), Expect = 2e-48
Identities = 95/223 (42%), Positives = 130/223 (58%), Gaps = 5/223 (2%)
Frame = +3
Query: 102 QSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIE 281
Q F +S ++ K+ G T YARKRL++Q K KYNTPKYRL+ R +N + Q+ Y+ ++
Sbjct: 301 QIFLQS-IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLK 359
Query: 282 GDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEY 461
D ++CAA S+EL R+GV GL +YAAAY+TG +
Sbjct: 360 CDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYF 419
Query: 462 NVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY-----DA 626
NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY +
Sbjct: 420 NVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDEG 479
Query: 627 ESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
ES K+ E H+A IFG H+ YM L+ ++F++QF K+ K
Sbjct: 480 ESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSK 522
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRR 143
LGFVKV+ K FKR Q K++RRR
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR 36
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 190 bits (462), Expect = 4e-47
Identities = 96/217 (44%), Positives = 134/217 (61%), Gaps = 3/217 (1%)
Frame = +3
Query: 72 LGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDV 251
+ FVK+V FKR Q KF+RRR G T YAR RL+VQ K KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 252 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 431
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 432 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 611
+ N++ P F LD+GL R+T G RVF A+KGA DGG+++PH+ +RF
Sbjct: 121 GNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 612 PGYDAES---KKFNAEVHRAHIFGLHVAEYMXSLEQD 713
PG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 176 PGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 162 bits (394), Expect = 7e-39
Identities = 92/236 (38%), Positives = 130/236 (55%), Gaps = 12/236 (5%)
Frame = +3
Query: 84 KVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQV 263
K+V + F R Q KF+RRR T R +L+ Q K KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 264 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 443
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 444 XXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR----F 611
EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R F
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCRLACKF 178
Query: 612 PGYDAESKKFNAEV--------HRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
D ++ K +V ++ +I G VA+YM L+++ E+ + +QF +Y+K
Sbjct: 179 DKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRKLKKESEEKYNKQFSRYVK 234
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 158 bits (384), Expect = 1e-37
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Frame = +3
Query: 234 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 413
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 414 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 593
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 594 HSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
HS KRFPGY + + ++A+ HR IFG HVA YM L+++D + +++QF Y+K
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPERYRKQFSAYLK 180
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 158 bits (383), Expect = 2e-37
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 KRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 290
K QVK +RRR G T R ++ Q + + K+RL+VR++ V CQ+ + ++GD
Sbjct: 8 KNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDR 67
Query: 291 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV- 467
++ A S EL RYG+ G TNY+AAY+TG Y+V
Sbjct: 68 VMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVT 125
Query: 468 EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA 647
+ +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+ + F+A
Sbjct: 126 KDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGHKPDG-SFDA 184
Query: 648 EVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
+ IFG +++EYM L D + +K QF YIK
Sbjct: 185 KELHDRIFGYNISEYMKQLRDGDPEKYKTQFSSYIK 220
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 102 bits (244), Expect = 1e-20
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +3
Query: 516 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 695
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Query: 696 XSLEQDDEDSFKRQFXKYIK 755
L ++DED++K+Q +YIK
Sbjct: 131 CFLMEEDEDAYKKQSLEYIK 150
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 222 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 97.5 bits (232), Expect = 3e-19
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Frame = +3
Query: 114 RSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R ++K +RRR G T R +L+ Q K K+ K R+I+R S ++++ Q+ S ++GD I
Sbjct: 15 RFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFI 74
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 473
+ ++Y L + K NY +Y G YN +
Sbjct: 75 LLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVKQSET-----------YNKK- 122
Query: 474 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-E 650
N +D+GL R T G + F +MKG+VD G+N+PH+ + + ++ + ++ E
Sbjct: 123 --NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKE 178
Query: 651 VHRAHIFGLHVAEYMXSLEQDDEDSFKRQF 740
+ G+H+ +Y+ L+ +DE+ K+QF
Sbjct: 179 LFNERSKGIHIIKYIDLLKNEDEEKLKKQF 208
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 57.2 bits (132), Expect(2) = 5e-18
Identities = 29/88 (32%), Positives = 51/88 (57%)
Frame = +3
Query: 489 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHI 668
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG ++ E
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG----DERVRCE------ 147
Query: 669 FGLHVAEYMXSLEQDDEDSFKRQFXKYI 752
H+A++ +L++++ + ++RQF +Y+
Sbjct: 148 ---HIAQWAEALKEENAELYQRQFSRYL 172
Score = 56.8 bits (131), Expect(2) = 5e-18
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 114 RSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R +V +RRR G T Y R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 294 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 377
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +3
Query: 48 HFVTSLXNLGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLI 227
H ++ L FVK + KR QVKFKRRRAG T AR RL+ Q K+KYNTPKYR +
Sbjct: 4 HARMNIYLLAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFV 63
Query: 228 VRLSNKDVTCQVAYSRIEGD 287
VR +NKD+T Q+ + I GD
Sbjct: 64 VRFTNKDITAQIISASIAGD 83
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +3
Query: 456 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 635
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 636 KFNAEVHRAHIFGLHVAEYMXSLE 707
+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 73.7 bits (173), Expect = 4e-12
Identities = 57/164 (34%), Positives = 77/164 (46%)
Frame = +3
Query: 123 VKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 302
V F+RR G T Y R L+ TP R++VR +N+ + Q+ +EGD + A
Sbjct: 9 VPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVA 61
Query: 303 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 482
AYS EL YG + + AAY TG + V+ ++
Sbjct: 62 AYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKALNA 96
Query: 483 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 97 GYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 45.6 bits (103), Expect(2) = 5e-10
Identities = 30/88 (34%), Positives = 43/88 (48%)
Frame = +3
Query: 114 RSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R +V +RRR T + R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 41.5 bits (93), Expect(2) = 5e-10
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 489 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 599
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 3e-09
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 489 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 37.1 bits (82), Expect(2) = 3e-09
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 KRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 290
K +++FKRRR G T R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 291 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 377
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 627 ESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 755
+SK+ +AEVHR +I+G HVA YM L +D+ + ++ F YIK
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIK 46
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +3
Query: 114 RSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 293
R +V F+RRR G T + R +L++ + R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 294 VCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 41.1 bits (92), Expect = 0.029
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 507 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 22/100 (22%), Positives = 43/100 (43%)
Frame = +3
Query: 78 FVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTC 257
+ K++ + F + VK +R R T + + K+R +N +++
Sbjct: 3 YQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNKSKKFRSYFTTTNTNLSG 62
Query: 258 QVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 377
+ +S + GD IV A S +L ++G+ N +Y G
Sbjct: 63 VITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 30.7 bits (66), Expect(2) = 0.002
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 495 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 599
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 45.2 bits (102), Expect = 0.002
Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 1/163 (0%)
Frame = +3
Query: 129 FKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 305
FKR+ AG T Y+++ +++ + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITD-YSKRLKLLKSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 306 YSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNG 485
L +YGV + N Y G +E NG
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVGYIA-------------------------GIESEKNG 92
Query: 486 PGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
+ LD G + G R+ +KG D G+ VPH FP
Sbjct: 93 VES--AVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +3
Query: 507 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 686
LD+G+ + G +++ +KGA+D GL +PH+ P + I G H+A
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP-------------EDSRIRGEHIA 149
Query: 687 EYMXSLEQDDEDSFKRQFXKYIK 755
+Y S++ D++++ +F YI+
Sbjct: 150 QYAESMDDDEKNA---KFANYIR 169
Score = 40.3 bits (90), Expect = 0.050
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +3
Query: 120 QVKFKRRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 299
+V+FKRRR G T R +LV + K R++VR+++ Q+ GD +
Sbjct: 8 KVQFKRRREGKTNYNKRYKLV-------DLDKTRMVVRITSNHTITQLVKIGENGDETLV 60
Query: 300 AAYSHELPRYGVKVGLTNYAAAYSTG 377
+A S L +G N +AAY TG
Sbjct: 61 SATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 40.7 bits (91), Expect = 0.038
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +3
Query: 117 SQVKFKRRRAGXTXXYARKRLVVQXKHKYNTPK 215
++++F+R + G T YARKRL +Q K++YNTP+
Sbjct: 35 AKLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 31.1 bits (67), Expect(2) = 0.29
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +3
Query: 135 RRRAGXTXXYARKRLVVQXKHKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 314
RR Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNYKKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHSR 61
Query: 315 ELPRYGVKVGLTNYAAAYSTG 377
L G K + A+Y TG
Sbjct: 62 YLASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.29
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 489 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q7QQ87 Cluster: GLP_42_9619_116; n=1; Giardia lamblia ATCC
50803|Rep: GLP_42_9619_116 - Giardia lamblia ATCC 50803
Length = 3167
Score = 33.5 bits (73), Expect = 5.8
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 12 ADAFCLVSVCGRHFVTSLXNLGFVKVVXHKQSFKRSQVKFKRRRAGXTXXYARKRLVVQX 191
ADA + GR+ VT L N + + +F S +K R G T + L
Sbjct: 1982 ADATYDSGILGRNSVTGLLNF-LTRPLRQSSTFSASSLK--RLSLGSTLSKRQLELSAHK 2038
Query: 192 KHKYNTPKYRLIV 230
HK+NTP L++
Sbjct: 2039 SHKHNTPDINLVL 2051
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,954,474
Number of Sequences: 1657284
Number of extensions: 13133458
Number of successful extensions: 31334
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31300
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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