Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_D10
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 85  LTKPRFXREVTKWRPQTDT 29
           L  PR   EV  W P TDT
Sbjct: 520 LIMPRIQAEVNIWNPLTDT 538


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 512 CRLSTHHYWCSCLWSYEG 565
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 274 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 399
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 402 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 304
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,028
Number of Sequences: 336
Number of extensions: 3513
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)