Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_D08
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.76 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.76 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.76 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   7.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   7.1  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 582 VIFSIKLFINSIKPINIKYILSMNVFIRLYVFVENLCLLF*KY--FSSCL 725
           V+F++ L ++ +K    +YI   + FI  ++    L +L  KY    +CL
Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILLGKYTQLKACL 168


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 582 VIFSIKLFINSIKPINIKYILSMNVFIRLYVFVENLCLLF*KY--FSSCL 725
           V+F++ L ++ +K    +YI   + FI  ++    L +L  KY    +CL
Sbjct: 119 VVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILLGKYTQLKACL 168


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 582 VIFSIKLFINSIKPINIKYILSMNVFIRLYVFVENLCLLF*KY--FSSCL 725
           V+F++ L ++ +K    +YI   + FI  ++    L +L  KY    +CL
Sbjct: 439 VVFTLLLGVDFVKEYAFEYIQLYSQFILYFLLFATLKILLGKYTQLKACL 488


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 464 LSDEKEFKKVLIKILKWFSIRN 529
           L  +KEFK+ LIK ++    RN
Sbjct: 421 LKSKKEFKEELIKFIEEMLQRN 442


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 464 LSDEKEFKKVLIKILKWFSIRN 529
           L  +KEFK+ LIK ++    RN
Sbjct: 428 LKSKKEFKEELIKFIEEMLQRN 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,585
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)