Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_D08
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to isle...    30   1.8  
AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein...    30   1.8  
AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.        30   1.8  

>U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to islet
           cell diabetesautoantigen protein 1 protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +3

Query: 12  LYCLIXMVLNRMAKGAKELXIAATLEHXR 98
           +YC + ++  R+ +G +++ + AT+EH R
Sbjct: 705 VYCAVDVLCARLLRGIRQIDVVATVEHLR 733


>AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein
           protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +3

Query: 12  LYCLIXMVLNRMAKGAKELXIAATLEHXR 98
           +YC + ++  R+ +G +++ + AT+EH R
Sbjct: 705 VYCAVDVLCARLLRGIRQIDVVATVEHLR 733


>AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +3

Query: 12  LYCLIXMVLNRMAKGAKELXIAATLEHXR 98
           +YC + ++  R+ +G +++ + AT+EH R
Sbjct: 705 VYCAVDVLCARLLRGIRQIDVVATVEHLR 733


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,431,837
Number of Sequences: 27780
Number of extensions: 236068
Number of successful extensions: 524
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)