Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_D06
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens ...    33   0.50 
U85715-1|AAD21218.1|  853|Homo sapiens sperm oocyte binding prot...    29   6.1  
BC047535-1|AAH47535.1|  853|Homo sapiens A kinase (PRKA) anchor ...    29   6.1  
AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens ...    29   6.1  
AF093408-1|AAC63371.1|  853|Homo sapiens protein kinase A bindin...    29   6.1  

>AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41637 fis, clone FEBRA1000030, weakly  similar
           to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
          Length = 207

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
 Frame = -2

Query: 274 LYNNNHNHTKH*GYYIECYCTVKLYIHVPAHGARPITKH*----IITYINSERNPHVHGY 107
           L+ + H HT    + I  Y     + H   H    +  H     ++T      + H H +
Sbjct: 56  LHTHTHTHTLSLYWLISLYIHTHTHTHTHTHAVLYLPTHTHTHAVLTLAYLPIHTHTHTH 115

Query: 106 QYETTDTYLLTHNMSLRIGKIRAKHTHS 23
            +  + T L TH +SL        HTH+
Sbjct: 116 THTLSCTSLYTHTLSLHWLTCLYTHTHA 143


>U85715-1|AAD21218.1|  853|Homo sapiens sperm oocyte binding protein
           protein.
          Length = 853

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 166 LSVWHRVLGRECKALLYNNIRYSSPN 243
           L++WH+   +ECK+L + +  + +PN
Sbjct: 458 LTLWHKSQQKECKSLGFQHAAFEAPN 483


>BC047535-1|AAH47535.1|  853|Homo sapiens A kinase (PRKA) anchor
           protein 3 protein.
          Length = 853

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 166 LSVWHRVLGRECKALLYNNIRYSSPN 243
           L++WH+   +ECK+L + +  + +PN
Sbjct: 458 LTLWHKSQQKECKSLGFQHAAFEAPN 483


>AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39621 fis, clone SMINT2001158. ).
          Length = 226

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = -2

Query: 271 YNNNHNHTKH*GYYIECYCTVKLYIHVPAHGARPITKH*IITYINSERNPHVHGYQYETT 92
           Y +   HT H   +   Y       H P H       H   T+I++  + H H   + +T
Sbjct: 140 YTHTSTHT-HPLTFTHTYPITHPLTHTPTHTHTHALTH-SHTHIHTHMHSHTHPLTHTST 197

Query: 91  DTYLLTHNMSL 59
            T+  THN+ L
Sbjct: 198 HTHPHTHNVWL 208


>AF093408-1|AAC63371.1|  853|Homo sapiens protein kinase A binding
           protein AKAP110 protein.
          Length = 853

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 166 LSVWHRVLGRECKALLYNNIRYSSPN 243
           L++WH+   +ECK+L + +  + +PN
Sbjct: 458 LTLWHKSQQKECKSLGFQHAAFEAPN 483


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,555,794
Number of Sequences: 237096
Number of extensions: 836136
Number of successful extensions: 1467
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)