Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D05
(708 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 37 0.018
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 32 0.40
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.69
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 0.92
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 0.92
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.6
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.1
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 2.1
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 2.8
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 2.8
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 6.5
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 28 6.5
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 439 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 579
E P EA+S D KVE P + E + EV+ATV E+ + +A E
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE 68
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 451 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 627
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 628 DLAPNVXSDAAAVPEIXTP 684
+ P+V A V E P
Sbjct: 1231 EAGPSVQEAEAPVKETERP 1249
Score = 31.5 bits (68), Expect = 0.69
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = +1
Query: 433 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 612
++E+P +A ++ + E PAA+PE + E +A V + + EE P A + E + D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEE-PEALN-EKAEDPKDEDET 644
Query: 613 MVKKIDLAPNVXSDAAAVPEIXTPEAA 693
+K ++ P ++A A E+ E A
Sbjct: 645 QEEKAEV-PIDEAEAEAQAEVAGEEKA 670
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +1
Query: 457 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 636
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 637 PNVXSDAAAVPEI 675
S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 13 EYIAWQSQRSHIKLIFYLNNLCQCFKKRRRVTGSIFKMKVLLL 141
+Y+ W+S R+ I + N +C+KKR +V GS + V +L
Sbjct: 788 DYMIWKSYRNTILIQNQSNETVRCYKKRLKVKGSEDNVNVSVL 830
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 448 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 609
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/95 (24%), Positives = 34/95 (35%)
Frame = +1
Query: 325 AIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPE 504
A PEA PE D K++ +P+A +A + E AQPE
Sbjct: 360 AQPEAPDATAQPEAPD--ATAQPEATETTAQPEAPKATALPEAPKATAQPEAPEATAQPE 417
Query: 505 DSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K E + + + + T A+ A A P
Sbjct: 418 APKATALPEAPEATAQPEATETTAQPKAQKATAQP 452
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 445 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISK-EEKPSATDAEGSADSAAIIPNMVK 621
P+A +A + + AQPE ++T Q + + E P AT A+ A A P K
Sbjct: 362 PEAPDATAQPEAPDATAQPEATETTAQPEAPKATALPEAPKAT-AQPEAPEATAQPEAPK 420
Query: 622 KIDL--APNVXSDAAAVPEIXTPEAADA 699
L AP + A P+A A
Sbjct: 421 ATALPEAPEATAQPEATETTAQPKAQKA 448
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 478 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 639
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++P
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISP 1178
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 594
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 445 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 600
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 436 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 588
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 600
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 601 IIPNMVKKIDLAPN 642
+ ++ P+
Sbjct: 1085 SVSALLSVFATEPS 1098
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 560 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 429
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = +1
Query: 427 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 606
AK + +A K A + + V ATVA S + T + S D+A +I
Sbjct: 1732 AKITPKASTDAAKVTPKASTEATEMTQKFSNVPATVALKSSNVEAKITP-KSSTDAARLI 1790
Query: 607 PNMVKKIDLAPNVXSDAAAVPEIXTPEAA 693
P K + NV S ++ TP+A+
Sbjct: 1791 PKASKSSTGSVNVKSRSSTNATQITPKAS 1819
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 28.3 bits (60), Expect = 6.5
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +1
Query: 436 SEIPDAEAKSADI-KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
+E P E K + KVE+P + PE K EV+ V+ KP G + P
Sbjct: 1013 NEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAP 1067
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAADA 699
V+ ++ AP D E P+ DA
Sbjct: 1068 VTVEVVETAPITLEDMKPTGE--APKVVDA 1095
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 463 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 627
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,272,645
Number of Sequences: 59808
Number of extensions: 270736
Number of successful extensions: 1059
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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