Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D05
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 32 0.46
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.4
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.5
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 29 3.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.3
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.3
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 5.7
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.7
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.7
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.7
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 7.5
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 7.5
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 7.5
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 7.5
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 9.9
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 460 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 636
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 637 PNVXSDAAAVPEIXTPEAADAP 702
P AA V +A+ AP
Sbjct: 125 P-----AAPVAPPQLTQASPAP 141
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 31.9 bits (69), Expect = 0.46
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 594
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 595 AAIIPNMVKKIDLAPNVXSDAAAVPE 672
+ K AP ++ A E
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE 209
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 1.1
Identities = 32/129 (24%), Positives = 46/129 (35%)
Frame = +1
Query: 307 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 486
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 487 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAV 666
PA P +T A AE + P+A + +A +A P D P + A A
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP---APAPAA 619
Query: 667 PEIXTPEAA 693
E P A
Sbjct: 620 EETPAPAPA 628
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/86 (25%), Positives = 30/86 (34%)
Frame = +1
Query: 445 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 624
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 625 IDLAPNVXSDAAAVPEIXTPEAADAP 702
+ P + AA P A +AP
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP 721
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +1
Query: 427 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 600
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 601 IIPNMVKKIDLAPNVXSDAAAVPEIXTPEAADA 699
P + D A + + A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 478 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 624
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 427 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 588
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 553 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIXTPEAADAPK 705
EKP++ +AE D + K ++L V A PE PEA+ K
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYK 330
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.3
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Frame = +1
Query: 313 DEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPA 492
+ PA+ E KD+ AP + + A A+SA VEE A
Sbjct: 576 ESAPALAEEHKDEAAPSE------------PVQDVPVEEVIEAVHIAPAESAPASVEE-A 622
Query: 493 AQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 660
A E ++ V+ AT A S E+P A +A+S P K + +P
Sbjct: 623 APSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDEASPTALESVE 682
Query: 661 AVPE---IXTPEAADAP 702
V E + + E+A AP
Sbjct: 683 DVIEAVHVASTESAPAP 699
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAADAPK 705
+ KK + +P+ + P T + D K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVK 1459
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAADAPK 705
+ KK + +P+ + P T + D K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVK 1459
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAADAPK 705
+ KK + +P+ + P T + D K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVK 1459
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAADAPK 705
+ KK + +P+ + P T + D K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVK 1459
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 496 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 639
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 496 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 639
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 585
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 586 ADSAAIIPNMVKK 624
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/89 (26%), Positives = 32/89 (35%)
Frame = +1
Query: 427 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 606
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 607 PNMVKKIDLAPNVXSDAAAVPEIXTPEAA 693
P K D +P A VP+ AA
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAA 636
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 160 VSLAMPVAEEKDVVPAQPIL 219
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 160 VSLAMPVAEEKDVVPAQPIL 219
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 160 VSLAMPVAEEKDVVPAQPIL 219
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 160 VSLAMPVAEEKDVVPAQPIL 219
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 454 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 633
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 634 APNVXSDAAAVPEIXTP 684
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 454 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 633
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 634 APNVXSDAAAVPEIXTP 684
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 454 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 633
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 634 APNVXSDAAAVPEIXTP 684
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 454 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 633
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 634 APNVXSDAAAVPEIXTP 684
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 439 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 579
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 446 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 547
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = +1
Query: 469 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVX 648
DIK + A + ++ +T+ + + +E K + D+ P K N+
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 649 SDAAAVPEIXTPEAADAPKL 708
+ +PE TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Frame = +1
Query: 472 IKVEEPAAQPEDSKTEVQATVAEISKE----EKPSATDAEGSADSAA---IIPNMVKKID 630
I V + ++ P S T +++K+ P +T + + A IPN I
Sbjct: 1024 ISVAQSSSTPPPSLTLYDVWTKQLAKDLLKNGTPGSTTTAPTVQAPAPSSSIPNTSTSIP 1083
Query: 631 LAPNVXSDAAAVPEIXTPEAADAP 702
AP+ +AA P+I P A AP
Sbjct: 1084 KAPSAPVLSAAPPKIVAPAAPAAP 1107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,050,254
Number of Sequences: 27780
Number of extensions: 198329
Number of successful extensions: 593
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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