Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D05
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 33 0.14
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.43
At3g49990.1 68416.m05466 expressed protein 31 0.57
At5g63550.1 68418.m07976 expressed protein 31 0.99
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 30 1.3
At1g12080.2 68414.m01397 expressed protein 30 1.7
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 29 2.3
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.3
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 29 3.0
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 29 3.0
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.0
At1g34590.1 68414.m04299 hypothetical protein 28 5.3
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 5.3
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 7.0
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 28 7.0
At1g12080.1 68414.m01396 expressed protein 28 7.0
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 9.2
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 445 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 597
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS 191
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +1
Query: 337 AKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPEDSKT 516
+ DD + EDS+ + S D++ +S D E+PA + D+K
Sbjct: 185 SSSDDDSDEDSEDEKPATKKAAPAAAKAASSSDSSDEDSDEESED---EKPAQKKADTKA 241
Query: 517 EVQATVAEISKEEKPSATDAE 579
+++ E S+ E+ + D E
Sbjct: 242 SKKSSSDESSESEEDESEDEE 262
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 251 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 147
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 442 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 579
+P A+ D+K E P A+P KT Q + E K+E+ +A AE
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE 465
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 439 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 618
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 619 KKIDLAP 639
K +P
Sbjct: 377 AKSTSSP 383
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 445 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA 567
P E K + K EE + E+ KTE ++ AE +EEK +A
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSAA 163
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +1
Query: 433 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 612
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 613 MVKKIDLAPNVXSDAAAVPEIXTPEAAD 696
KK ++ ++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 29.5 bits (63), Expect = 2.3
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Frame = +1
Query: 316 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 495
E+P +PE K + AP+ +I K E+P K +I+ E
Sbjct: 237 ELPKLPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKP-ELP----KMPEIQKPELPK 290
Query: 496 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK-KIDLAPNVXSDAAAVPE 672
PE K E+ TV E+ K E P + IP + K ++ P + A VPE
Sbjct: 291 VPEVPKPELP-TVPEVPKSEAPKFPEIP--KPELPKIPEVPKPELPKVPEITKPA--VPE 345
Query: 673 IXTPEAADAPKL 708
I PE P+L
Sbjct: 346 IPKPELPTMPQL 357
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 316 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 492
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 493 AQPEDSKTEVQATV-AEISKEEK 558
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 439 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 618
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 619 KKIDLAPNVXSDAAAVPEIXTPE 687
+++ + A AV E E
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKE 210
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 439 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 618
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEEKK 187
Query: 619 KKIDLAPNVXSDAAAVPEIXTPE 687
+++ + A AV E E
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKE 210
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 313 DEVPAIPEAKKDDIAPE 363
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 427 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 585
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 586 ADSAAIIPNMVK 621
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 442 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 618
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 619 KKIDLAPNVXSDAAAVPEIXTPEAADA 699
+D AP+ +A P + EA A
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVA 519
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 449 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 562
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 448 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 597
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 454 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 627
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 628 DLAPNVXSDAAAVPEIXTPEAADAP 702
D V + ++ + PE+A AP
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAP 223
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +1
Query: 430 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 609
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 610 NMVKKIDLAPNVXSDAAAVPEIXTPEAAD 696
KK ++ ++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 415 FLRFSLQERFPVSRYRSLLGLYRPFWPLV 329
FL F E PV ++ L L RP WPL+
Sbjct: 25 FLSFPRPENTPVQLFQLLHTLERPGWPLL 53
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,410,787
Number of Sequences: 28952
Number of extensions: 185052
Number of successful extensions: 437
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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