Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D04
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 62 7e-10
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 52 7e-07
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 50 2e-06
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 45 8e-05
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 41 0.001
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 41 0.001
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 39 0.004
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 37 0.022
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 35 0.067
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 33 0.27
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 33 0.27
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 33 0.27
Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical pr... 32 0.62
AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein. 32 0.62
AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical ... 32 0.62
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 31 1.1
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 1.4
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 2.5
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 30 2.5
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 30 2.5
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 30 2.5
U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical pr... 29 3.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 29 5.8
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/74 (43%), Positives = 38/74 (51%)
Frame = +1
Query: 277 QMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANH 456
++ P T CP C IVTR V T +F L L GC C +P+C SCKD H
Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126
Query: 457 YCPNCNAYIGSYNR 498
CPNC A IG + R
Sbjct: 127 TCPNCRAMIGVHRR 140
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 PQQFVTVVPAQQMGPEPTN--TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCAC 417
P V +V + P + T+C SC + T V + T + +L LI P A
Sbjct: 70 PNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAF 128
Query: 418 IPYCTDSCKDANHYCPNCNAYIGSYNR 498
+P+C DSCKDA+HYCP CNA +G R
Sbjct: 129 VPFCLDSCKDAHHYCPRCNALLGIKKR 155
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +1
Query: 292 PTNTSCPSCSAAIVTRVDHVP-VTKTHLFALL------LCLIGCCPCACIPYCTDSCKDA 450
P CP C IV+ ++ V V +FA+L L +I C C C+P+ D D
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFC-CVPFFLDQLLDV 101
Query: 451 NHYCPNCNAYIGSYNR 498
NH CP C ++G +NR
Sbjct: 102 NHSCPACKKFLGRFNR 117
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 280 MGPEPTNTSCPSCSAAIVTRVDHVP--VTKTHLFALLLCLIGCCPC--ACIPYCTDSCKD 447
+ P CP C T + V T F +L+ P +P+C ++ KD
Sbjct: 29 LSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKD 88
Query: 448 ANHYCPNCNAYIGSYNR 498
A HYCP+C A+IG+Y R
Sbjct: 89 AEHYCPSCRAWIGTYRR 105
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/85 (32%), Positives = 37/85 (43%)
Frame = +1
Query: 244 PQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIP 423
PQ+ + V EP CP C+ + TRV+ + L L L P C
Sbjct: 50 PQEIIIVGTKMAPSFEPYTEFCPRCNTNVCTRVERT-MGFCSWTMLFLGLFVFFPLLCC- 107
Query: 424 YCTDSCKDANHYCPNCNAYIGSYNR 498
+C D KD+ H CPNC + SY R
Sbjct: 108 FCLDGFKDSRHSCPNCGTIL-SYKR 131
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 301 TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPY----CTDSCKDANHYCPN 468
T CP+C A +T V+ T + L+C G C C P+ C D KD NH CP+
Sbjct: 34 TYCPTCEKAYMTSVN----THIGVCWWLICFFGTVLC-CFPFLFFLCCDVSKDVNHNCPS 88
Query: 469 CNAYIGSYNR 498
C + NR
Sbjct: 89 CGMLLAKKNR 98
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 44.8 bits (101), Expect = 8e-05
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 223 PSVTPAPPQQFVTVVPAQQMGPEPT-NTSCPSCSAAIVTRVDHVPVTKTHLFALL-LCLI 396
P + P P + + V+ +Q + +C C + TRV+H L A L C
Sbjct: 34 PPIDPRPCGRVIGVISVKQAPTYSSYQENCTRCQTLVQTRVEHKIGIMWWLCATLSFCFF 93
Query: 397 GCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 498
CC P KDA H+CPNC + + R
Sbjct: 94 FCCYLLFFPIT----KDAQHFCPNCGSLLAVRTR 123
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +1
Query: 307 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 486
CP C ++ TR H T + + + C P C S KD H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTMLA 146
Query: 487 SYNR 498
R
Sbjct: 147 CKKR 150
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 307 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC---CPCACIPYCTDSCKDANHYCPNCNA 477
CP C I+T V T + L+C G C I C D KD +H CPNC
Sbjct: 36 CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWPILICLCFDVSKDVDHNCPNCGL 91
Query: 478 YIGSYNR 498
+ + NR
Sbjct: 92 LLATSNR 98
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 289 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFAL--LLCLIGCCPCACIPY--CTDSCKDANH 456
EP C C VTR T+T L A ++ +IGC I Y C DS KD H
Sbjct: 17 EPHQVFCQKCQCNQVTR------TETQLGACWWVVFIIGCLLFWPICYWLCCDSSKDTMH 70
Query: 457 YCPNCNAYI 483
YCP+C +
Sbjct: 71 YCPSCGTLL 79
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 307 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 486
C +C + T+ + V + + CL PC + + D +H CPNCN +G
Sbjct: 27 CTNCQETVTTKTEQV-FGMLNFALFITCLF--LPCFIVCFWCRCFMDVHHRCPNCNKSLG 83
Query: 487 SYNR 498
+R
Sbjct: 84 KRDR 87
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 289 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 468
+P CP C +VT V++ L +L+ + + C +DA H+CPN
Sbjct: 11 KPYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPN 68
Query: 469 CNAYIGSYNR 498
C + R
Sbjct: 69 CGMVLSRKKR 78
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 361 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 498
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 361 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 498
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 289 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 468
EP + CP C TR++ A + P C C S KD HYCP+
Sbjct: 17 EPYSEYCPKCQCNHTTRMESRR-GNCWWIAFFIGFFLFFPI-CYWLCCQSSKDTLHYCPS 74
Query: 469 CNAYIGS 489
C + +
Sbjct: 75 CGTLLAT 81
>Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 220 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 342
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 220 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 342
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 220 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRV 342
+PS+ +PPQ ++ P Q P TN++ S+++ T +
Sbjct: 61 LPSIFTSPPQTVISEAPPQSFTPSATNSTSDKTSSSLKTEL 101
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +1
Query: 220 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLC-LI 396
+P TP QQ A Q + + +S C A + + V + +++
Sbjct: 323 MPQCTPQCVQQQTICAAACQPSCQSSCSSNAQCVQACLPSCESSCVQQQQPSVVVVQDSQ 382
Query: 397 GCCPCACIPYCTDSCKDANHYC-----PNCNAYIGS 489
CP AC P C+ C A + C P+C + GS
Sbjct: 383 SSCPSACQPSCSQQCIQAQNLCQSACQPSCQSSCGS 418
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 214 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCP 312
P P+ +PAPP Q V QQ PT+ S P
Sbjct: 414 PPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAP 446
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 388 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGS--YNR*IFQLVQ*IINCKNNILVLLF 561
C+I C C +C +S + N CP C A+ G+ NR + L ++ + NI +
Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGNPIRNRQLESLTMSYVSSR-NISTEYY 76
Query: 562 NSILSYELSIAL 597
+ SY+ + L
Sbjct: 77 ERMKSYQKKLLL 88
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 RTPAKMQTITVRIAT-RTLEATIAKYF 508
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 RTPAKMQTITVRIAT-RTLEATIAKYF 508
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 RTPAKMQTITVRIAT-RTLEATIAKYF 508
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 437 RRPAQTQTFPLQLETGQTIECTVAKYF 463
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 RTPAKMQTITVRIAT-RTLEATIAKYF 508
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 315 RRPAQTQTFPLQLETGQTIECTVAKYF 341
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 RTPAKMQTITVRIAT-RTLEATIAKYF 508
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 334 RRPAQTQTFPLQLETGQTIECTVAKYF 360
>U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical
protein W03B1.6 protein.
Length = 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +3
Query: 126 TENRFVWRALRTASTKSASVQQPDTARSIPGRSFRHPRAPPAVRYSCSGTTNGP*AHEH* 305
T+ + W A+ + S + +T RSIP RH P+ +Y + N A+
Sbjct: 76 TKKNYQWNINDVANLIAPSCEY-ETVRSIPMGWCRHKDLKPSGKYKIAMIGNSWTANHAS 134
Query: 306 LPFMQCGNRHQSRSRASD*NPPVCFASLPNRLLPMC 413
L + +CG + S + S C P L P C
Sbjct: 135 LVYQECGYQANSILQGSF---GYCEVLYPTTLRPHC 167
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Frame = +1
Query: 220 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVP------VTKTHLFAL 381
+P P QQ VP P + PSCS + V + P T + L
Sbjct: 238 MPRCLPTCIQQIQISVPLPPPAPRCDSMCMPSCSPSCVQQYSLCPQQCRPMCTNACVTNL 297
Query: 382 LLCL-IGCCPCACIPYCTDSCKDANHYCP 465
+ + C AC+P CT SC CP
Sbjct: 298 QVSRPVSQCLPACMPSCTSSC--VQSMCP 324
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 214 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 327
P S P VTVVP P P+++ PS S A
Sbjct: 298 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 335
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 214 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 327
P S P VTVVP P P+++ PS S A
Sbjct: 505 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 542
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 214 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAA 327
P S P VTVVP P P+++ PS S A
Sbjct: 505 PGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNPSSSPA 542
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 304 SCPSCSAAIVTRVDHVPVTKTHLFALLLC-LIGCCPCACIPYCTDSCKD 447
SC SCSA +V V V+ + + ++ C C+P C +C D
Sbjct: 19 SCSSCSAPVVAPAP-VAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCVD 66
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +1
Query: 286 PEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCP 465
P P + P C + V VPVT T CC C C P CT++C +
Sbjct: 83 PPPCSCGTPGCMQCVQQTV-LVPVTTTT----------CCKC-CQPVCTNACTNGGGCSC 130
Query: 466 NC 471
C
Sbjct: 131 GC 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,600,307
Number of Sequences: 27780
Number of extensions: 423720
Number of successful extensions: 1485
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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