Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D02
(779 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 33 0.003
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 27 0.13
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 23 2.1
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 23 2.7
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.7
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 23 2.7
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 23 3.6
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 23 3.6
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 6.3
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 213 DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNI 341
D +L RL+ + L+NNR+ + +N H++ +L+ V L +N I
Sbjct: 36 DAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTI 78
Score = 27.1 bits (57), Expect = 0.17
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 129 KIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCIL---LNNNRIVRIGENLEHY 299
K+P A+ +D S N I L L R KC+ L+ NR+ +I
Sbjct: 357 KLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKCLSWLDLSYNRLGQIDAGTFKG 416
Query: 300 IPNLESVILTNNN 338
IP L S+ L +N+
Sbjct: 417 IPRLASLNLGHNS 429
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 27.5 bits (58), Expect = 0.13
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +3
Query: 576 KTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQPVT 755
+ VPG + + V L P + IR +N E ++ + ++PG P
Sbjct: 946 RVLVPG-DQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRV 1004
Query: 756 QTNGQ 770
+TN Q
Sbjct: 1005 ETNDQ 1009
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 671 CILDCFSDLMDFLRCKICNFRIRHISTRYKGL 576
C++D + +FL + N IR +RYK L
Sbjct: 175 CLMDVY---YEFLLISLINILIRSFKSRYKDL 203
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 689 RTSDQNVAVWSDSRTKTFTACD 754
RT+D + +WSD + K+ A D
Sbjct: 403 RTTDTFLDLWSDYQNKSLAAFD 424
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 26 TRNSKNGQTYNGAHTKLYAIYESL*GP 106
T+N + TYN KL +Y+SL GP
Sbjct: 342 TKNHYSKNTYNEQGNKLADLYKSL-GP 367
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 26 TRNSKNGQTYNGAHTKLYAIYESL*GP 106
T+N + TYN KL +Y+SL GP
Sbjct: 234 TKNHYSKNTYNEQGNKLADLYKSL-GP 259
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -2
Query: 493 LIFLKS--NNLSSGILNATYAL*WFLLATGLCMSDNVRSFGNV 371
LIFL + L GI+N+T L + L+ T M +N+ + G+V
Sbjct: 86 LIFLVNWYPRLIIGIMNSTLNLIFLLIQTRFEMINNIITRGDV 128
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 106 ENWILEVIRFHKSKI 150
E W+ +V+ FHK K+
Sbjct: 65 EQWMQKVVSFHKLKL 79
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 106 ENWILEVIRFHKSKI 150
E W+ +V+ FHK K+
Sbjct: 65 EQWMQKVVSFHKLKL 79
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 173 KLIERSTQIFDLWNLITSKIQFSVPTRIHILHRVLYEL-RCKFDHFCYFS 27
KL+ R +IF L L+ + F + T++ + VL + + + H Y S
Sbjct: 231 KLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYIS 280
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,182
Number of Sequences: 336
Number of extensions: 4295
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -