Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D02
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 77 2e-14
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 64 2e-10
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 60 2e-09
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 57 1e-08
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 53 2e-07
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 51 9e-07
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 46 3e-05
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 45 8e-05
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 45 8e-05
SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 43 3e-04
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 38 0.007
SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 36 0.028
SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 35 0.064
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 34 0.15
SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) 32 0.60
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 32 0.60
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3) 31 1.0
SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0) 30 1.8
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9) 30 1.8
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4) 30 2.4
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 29 4.2
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40) 29 4.2
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 29 5.6
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 5.6
SB_33731| Best HMM Match : Exonuc_X-T (HMM E-Value=6.2e-06) 29 5.6
SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 28 7.4
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 28 7.4
SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) 28 7.4
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 28 9.8
SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 28 9.8
SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11) 28 9.8
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 175 bits (427), Expect = 3e-44
Identities = 99/215 (46%), Positives = 130/215 (60%), Gaps = 6/215 (2%)
Frame = +3
Query: 120 RGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHY 299
RG KI IEN+GATLDQFDTIDFSDNDIRK++GFPLLKRLK ILLNNNR+ R+ E L
Sbjct: 517 RGCKISVIENMGATLDQFDTIDFSDNDIRKIEGFPLLKRLKTILLNNNRVCRVAEGLGEC 576
Query: 300 IPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 479
+PNLES+ILTNN + EL DL+PL ++ LR L + + K+ Y +
Sbjct: 577 LPNLESIILTNNAMQELKDLEPLESVKSLRYLRIQGHAQQRKSSEYFYCKLHKLSPYEIG 636
Query: 480 FRKIKQKERDEANALFKSRKGKEIQREI--AKKAKTFVPGGNMPDPKVTNLTP----QEI 641
+ I R E KG ++++ + K KTF PG N P +V P +++
Sbjct: 637 GKPINDNRRKEMQL-----KGCFLEKKAPPSSKPKTFTPGENPPAKRVEQKPPPPPSRDV 691
Query: 642 HKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQ 746
I+ AI NA SL EV+ L R+L++GQ+PG P Q
Sbjct: 692 AAIKAAIANAKSLDEVQGLERLLKAGQVPGVVPTQ 726
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 76.6 bits (180), Expect = 2e-14
Identities = 48/140 (34%), Positives = 75/140 (53%)
Frame = +3
Query: 111 LDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 290
L L I +IE L ++ +D S N+I ++G L +LK + L NNRI +I EN+
Sbjct: 70 LQLDNNIIEKIEGLDMLVN-LQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKI-ENM 127
Query: 291 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELR 470
+ + NL + NN++ +L ++ L LRTL+L NP + Y+ YV +P+L
Sbjct: 128 DS-LTNLHVFSIGNNSLKQLDNVIYLRRFKNLRTLNLSFNPFCEDSKYKEYVIAHLPDLV 186
Query: 471 LLDFRKIKQKERDEANALFK 530
LDFR I + R+ A +K
Sbjct: 187 YLDFRLIDETAREAATERYK 206
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 63.7 bits (148), Expect = 2e-10
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +3
Query: 111 LDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 290
L L+ + ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+
Sbjct: 39 LYLQQNMLKKVENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGDIK 97
Query: 291 E-HYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK-NHYRAYVAFKMPE 464
E L V L+ N I + +D L+ +P L L+L+ NPV K +YR + K+
Sbjct: 98 ELASCQKLSIVDLSYNKIDDPNIVDVLAEMPNLSVLNLIGNPVIKKIKNYRKNMILKLKN 157
Query: 465 LRLLDFRKIKQKER 506
L+ LD R + +ER
Sbjct: 158 LKYLDDRPVFPRER 171
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +3
Query: 246 ILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDL-DPLSTLPKLRTLSLMHNPVAN 422
+ L +N ++ + L H + LE ++L N +++L D+ L + +L L+L +NP+A
Sbjct: 170 VYLQDNMLIEVNGLLRH-LTCLEVLMLNGNQLTKLTDVVHELRAMQRLHDLNLFNNPLAQ 228
Query: 423 KNHYRAYVAFKMPELRLLDFRKIKQKERDEANALFKSRKGKEIQREIAKKAKTFVPGGNM 602
YR+YV ++ L++LD R++ Q ER K++K E RE+ K+ +F +
Sbjct: 229 DYDYRSYVIHRIKSLKILDRREVLQAER------IKAQKKYEPDREMVKETVSFGRRVDG 282
Query: 603 PDPKV 617
P KV
Sbjct: 283 PPQKV 287
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 303 PNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDF 482
PNL+ + L NNIS+L ++D L+ LP L T+SL NP+ + +H++ Y K+ L L F
Sbjct: 110 PNLKILCLQGNNISDLHEIDKLAALPNLHTISLQGNPIEDDDHFKCYTTSKL--LHLKKF 167
Query: 483 RKIKQKERDEA 515
++D+A
Sbjct: 168 NSAPLTKQDKA 178
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 57.2 bits (132), Expect = 1e-08
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Frame = +3
Query: 111 LDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 290
L L G +I ++NL L + S++ +++L G LK + +N I +I ENL
Sbjct: 21 LTLIGQEIEVLQNLDC-LPHLTELCVSESSLKELSGIDKCTNLKKVYFYDNHISKI-ENL 78
Query: 291 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMH-----NPVANKNHYRAYVAFK 455
+ L + L NNNI + DL L LP L++LSL NPV+ +Y ++ F
Sbjct: 79 SS-LTRLTVLWLNNNNIQAIEDLTNLVHLPHLKSLSLKDPTYGPNPVSLLCNYATHLLFH 137
Query: 456 MPELRLLDFRKIKQKERDEANALFKSRK 539
+P+L LD + K E S+K
Sbjct: 138 LPKLTRLDSYDVDNKALKELAEATVSKK 165
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 216 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 395
GF L+ + L N I + E L P L+ + L++NN++ L D L LP+LR L
Sbjct: 1067 GFESCSSLEELSLEGNCISKF-EGLVRN-PKLKWLNLSSNNLTIL-DTGMLERLPELRYL 1123
Query: 396 SLMHNPV 416
SL +N +
Sbjct: 1124 SLENNNI 1130
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/138 (28%), Positives = 65/138 (47%)
Frame = +3
Query: 108 ELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGEN 287
EL L + I L + + + + + L FP L L+ + L++NRI +N
Sbjct: 19 ELILDNCRSTSIVGLTDEFVKLEILSMINVGLTTLKNFPKLPNLRKLELSDNRISSGLQN 78
Query: 288 LEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPEL 467
L P L + L+ N I +L L+PL L L++L L + V N + Y+ V +P L
Sbjct: 79 LTG-SPKLTHLSLSGNKIKDLETLEPLEKLSNLKSLDLFNCEVTNVDDYKNKVFELIPSL 137
Query: 468 RLLDFRKIKQKERDEANA 521
R LD + E +E ++
Sbjct: 138 RYLDGCDKEGNEAEETDS 155
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Frame = +3
Query: 105 RELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLN-----NNRI 269
R LDL I IENL + L + + + N I +++G L L + L +NRI
Sbjct: 334 RILDLSFNVIKVIENLNS-LTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKIRSNRI 392
Query: 270 VRIGENLEHYIPNLESVILTNNNISELG---------------DLDPLSTLPKLRTLSLM 404
V + + LEH + +LE + +++N I E+ DLD L+ PKL T+ L
Sbjct: 393 VEL-KGLEH-LESLEELYISHNGIEEIKGLESLFNDNQLKHWEDLDELAKCPKLHTVYLE 450
Query: 405 HNPVANKNHYRAYVAFKMPELRLLD 479
NP++ YR V +P L+ +D
Sbjct: 451 RNPLSRDTAYRRKVKLALPALKQID 475
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/104 (34%), Positives = 57/104 (54%)
Frame = +3
Query: 105 RELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 284
R L+ + I I++L A L + +D DN I ++ G LK L+ ++L NRI +I
Sbjct: 166 RLLNFQHNLIRNIQHL-ANLRRLIFLDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKI-N 223
Query: 285 NLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 416
NLE + L+ + L N IS+ ++ LS L +LR L+L N +
Sbjct: 224 NLE-ALTKLDVLDLHGNRISK---IENLSHLTELRVLNLAGNEI 263
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +3
Query: 300 IPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 479
+ NL+ + L+ N IS D++ L+ + LSL NP A+ Y+ V + LR LD
Sbjct: 322 LSNLQRLFLSFNCISRFEDINCLTRSTSITELSLDGNPFASDVTYKQTVLKSVTCLRQLD 381
Query: 480 FRKIKQKERDEANALFKSRKGKEIQREIAKKA 575
++I ++ER A+ +RK +E ++E+ K A
Sbjct: 382 MKRITEEER--RIAMVMARKEEEKKKEVNKLA 411
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 234 RLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNP 413
RLK + L+ N I + + +E + LE++ L NNIS L DL L L L+ L L NP
Sbjct: 49 RLKNLDLSRNAIQSL-QGVES-LQLLETLNLYYNNISYLQDLSALKYLTNLKELDLRLNP 106
Query: 414 VA-NKNHYRAYVAFKMPELRLL 476
V N+ YR Y+ +P L+ L
Sbjct: 107 VTKNEPDYRLYIVHLLPSLKRL 128
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = +3
Query: 180 IDFSDNDIRKLDGFPL-LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGD 356
+D S N I+ + P L+ LK ++LN+N + + L+ + +E I N +S L +
Sbjct: 131 LDLSHNSIQFVSATPRDLRHLKSLILNHNNLQSLS-GLDCLVGLIELGI-AENRVSTLTE 188
Query: 357 LDPLSTLPKLRTLSLMHNPVANKNHYRAYV--AFKMPELRLLDFRKIKQKERDEANALFK 530
L+ + +LR LS+ NP+ + +YR + F ++ +LD + +ER N FK
Sbjct: 189 FSKLTCMSQLRYLSVNGNPLTRETYYRVKIFHYFNGKDI-VLDNKSKTVRERARLNQHFK 247
>SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038)
Length = 92
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 276 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFK 455
I N I LES + +N + DLD L+ PKL T+ L NP++ YR V
Sbjct: 21 ISHNGIEEIKGLES-LFNDNQLEHWEDLDELAKCPKLHTVYLERNPLSRDTAYRRKVKLA 79
Query: 456 MPELRLLD 479
+P L+ +D
Sbjct: 80 LPALKQID 87
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 41.9 bits (94), Expect = 6e-04
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 6/216 (2%)
Frame = +3
Query: 108 ELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGEN 287
+L L I + +LG L + + LDG L L + L N I +
Sbjct: 737 KLKLSNSIISTVRDLGTCLTNLRMLWMCRCSLSDLDGISSLSSLAELYLAFNDISDVSP- 795
Query: 288 LEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPEL 467
+ NL+ + L N + E+ ++ L+ L+ L+L NPV H A EL
Sbjct: 796 -VSMLDNLQVLDLEGNLVDEIAQVEFLTLCSSLKCLNLEGNPVCTAPHPDA----SEEEL 850
Query: 468 RLLDFRK-IKQ-----KERDEANALFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLT 629
D+RK + Q + D+ L + GK + R++ AK G +PD +T
Sbjct: 851 ASYDYRKAVHQAVPSLRFLDDEPFLVEKVDGKPVLRDMPDSAK----GVRIPDHLIT--- 903
Query: 630 PQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQK 737
+ H I E IK ++ E+ R SG P +
Sbjct: 904 --DWHIINEGIKAVDVAEDDEKANRP-SSGNRPSSR 936
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/98 (30%), Positives = 45/98 (45%)
Frame = +3
Query: 132 IPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 311
I +I+NL + + DN+I K+ L + L NN+I RI E L+H L
Sbjct: 41 IDEIDNL-SMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISRI-EGLDH-CRRL 97
Query: 312 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK 425
+ L N+I+ + LD L L +L + H P K
Sbjct: 98 SKLYLGGNSITVIEGLDKLENLRELH-MEKQHLPPGEK 134
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 228 LKRLKCIL-LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDP-LSTLPKLRTLSL 401
L + C+L ++ N I I E + N+ +N ++++ +L ++ P L L +
Sbjct: 145 LSKCLCVLNISENNIDSIDEL--QCLTNMTQFFTEHNLLADMKELSRVMAAWPYLWRLEV 202
Query: 402 MHNPVANKNHYRAYVAFKMPELRLLDFRKI 491
NP+ K YR + L +LD ++I
Sbjct: 203 SGNPLCQKKKYRDRIIVMSNSLVMLDGKEI 232
>SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 393 LSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEA 515
LS + + YR Y+ K+P+L+ LD R +K++ER EA
Sbjct: 11 LSFTDHDEEDYQRYRYYILHKLPKLKFLDSRTVKEQERQEA 51
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 237 LKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 416
LK + LNNN + RI + LE + L NNNI+EL D + P L+ L + N +
Sbjct: 190 LKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITEL-DQRLFTRTPSLKLLFVSFNSL 248
Query: 417 A 419
A
Sbjct: 249 A 249
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 177 TIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL 350
++D S N + L D F L L+ + L+ NR+ I E H + L+ + L NNN+
Sbjct: 120 SLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTF 179
Query: 351 GDLDPLSTLPKLRTLSLMHN 410
+ TL L++L L +N
Sbjct: 180 SERTLQGTL-SLKSLQLNNN 198
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 219 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL--GDLDPLSTLPKLRT 392
F L+ L+ + LNNN I + + L P+L+ + ++ N+++ L G LST K
Sbjct: 208 FRNLRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAK--- 264
Query: 393 LSLMHNP 413
+SL +NP
Sbjct: 265 VSLHNNP 271
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 36.3 bits (80), Expect = 0.028
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Frame = +3
Query: 102 DRELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIG 281
D + DL +K + NL + L +++++S N I +++ L L+ + L++N++ I
Sbjct: 951 DFKYDLSLFK--SLSNLESLLPNIESLNWSHNCIEEINHLESLSELEVLDLSHNKLRAIP 1008
Query: 282 ENLEHYIPNLESVILTNNNISELGDLDPLSTL----------------------PKLRTL 395
NL + N+ + L NN +S + L+ L +L P L L
Sbjct: 1009 TNLNAKLGNIRKLNLANNQLSCVDGLEKLYSLVELDLRSNLLTEVSSVVLIGDLPCLENL 1068
Query: 396 SLMHNPVANKNHYRAYVAFKMPE---LRLLDFRKIKQKERDEANALFKSRKGKEI 551
L NP+ ++ YR V E L LD + +E + + L + EI
Sbjct: 1069 HLEGNPLTKESSYRVRVLSGFGERARLVSLDGQPPSDREMKKVSELLSREQDFEI 1123
>SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 36.3 bits (80), Expect = 0.028
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = +3
Query: 141 IENLGATLDQFDTIDFSDNDI----RKLDGFPLLKRLKCILLNNNRIVRIGENLEHY--- 299
++N+ +L + ID S N++ R F LK +K I L+ N++ G L
Sbjct: 462 LDNVVPSLKLLEHIDLSRNNLSNWTRMTSTFDGLKSIKHINLSANKMCDAGVGLLAKALV 521
Query: 300 -IPNLESVILTNNNISELGDL---DPLSTLPKLRTLSLMHNPVANK 425
+ NLE + L N I+ G + D LS L +L LSL N +ANK
Sbjct: 522 NLSNLEVLHLAWNEITCEGAILLADSLSGLTRLEALSLKSNKIANK 567
>SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 35.5 bits (78), Expect = 0.049
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +3
Query: 162 LDQFDTIDFSDNDIRKLD-GFPLLKR---LKCILLNNNRIVRIGEN-LEHYIPNLESVIL 326
+ QF +D+ D D D G L R ++C+ L+N +I + YIPN+E + L
Sbjct: 271 IQQF-VVDYCDRDHEITDIGVTALARFCDIRCLHLSNGQISDNALLVIAEYIPNIEDLSL 329
Query: 327 TNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFR 485
+ +S++G + + KL +L ++HN ++ AF + DFR
Sbjct: 330 EFSQVSDVGIFKLMQSCRKLESL-VVHNSDNHERGITDASAFMIGHYACEDFR 381
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 35.1 bits (77), Expect = 0.064
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 117 LRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPL--LKRLKCILLNNNRIVRIGENL 290
L+ KI IEN GA +D S+N I ++D L L L +LLNNN++ +
Sbjct: 358 LKNNKIVAIEN-GAFPLNLRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILPNGG 416
Query: 291 EHYIPNLESVILTNNNISEL 350
+ + ++ + L NN ++ +
Sbjct: 417 DFHNKQIDRLDLKNNRLTTI 436
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 213 DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRT 392
+G + L + L NN I I + + NL+S+ L +NNIS L + + LP L
Sbjct: 122 NGLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNIS-LWEGNISRDLPSLEI 180
Query: 393 LSLMHNPV 416
L L NPV
Sbjct: 181 LELDGNPV 188
>SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021)
Length = 198
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 111 LDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 284
L L+ + ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+
Sbjct: 131 LYLQQNMLKKMENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGD 187
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 306 NLESVILTNNNISEL-GDLDPLSTLPKLRTLSLMHNPVA 419
+L S+ L+ NN+ +L ++ L TLPKLR L + NP+A
Sbjct: 206 HLLSLDLSCNNLPDLYSTINTLKTLPKLRNLVMQGNPLA 244
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 111 LDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDG-FPLLKRLKCILLNNNRIVRIGEN 287
L+L ++ + + L++ + SDN+I L L+ L+ + L++NR++ + +
Sbjct: 172 LNLEANELKIVPEVVTKLEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLPKK 231
Query: 288 LEHYIPNLESVILTNN 335
L ++ L + + NN
Sbjct: 232 LHEFLTGLYILDINNN 247
>SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3)
Length = 227
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +3
Query: 399 LMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANALFKSRKGKEIQREIAKKAK 578
L H+P NKN +A + +LR L K+ + + D + K + + +E A++
Sbjct: 133 LWHSPETNKNGLLRQIAEREDKLRKLKMVKMYRTKNDLTDLQKLIDKWRNVSQEAAERLL 192
Query: 579 TFVPGGNMPDPKVTNLTPQ 635
T + P PK+ L Q
Sbjct: 193 TKIK--KEPSPKMKELLDQ 209
>SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 566
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 108 ELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLD 215
+LD + Q++ L T DQ D +DF+++ + KLD
Sbjct: 240 QLDKLDFTEDQLDKLDFTEDQLDKLDFTEDKLGKLD 275
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 GYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPL-LKRLKCILLNNNRIVRIGENLEHY 299
G + Q+ + A L T+D + ++ ++ L L+ L+ + L N + + E L
Sbjct: 4 GDGVEQLLSTAAALGT-TTLDLNRKNLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFER 62
Query: 300 IPNLESVILTNNNISEL 350
+PNL+ + L NN+I+E+
Sbjct: 63 LPNLKWLDLRNNHINEV 79
>SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9)
Length = 193
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 336 NISELGDLDPLST-LPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 479
+IS+L L+ L P LRTL L NP+ + + Y V P L LD
Sbjct: 131 DISKLSALEALQGGCPGLRTLDLRGNPICHSDTYPKDVIALFPNLTKLD 179
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 219 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNIS-ELGDLD-PLSTLPKLRT 392
F L LK + L NNRI I + + +LE + L+NN+IS + +++ P L L +
Sbjct: 152 FKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTVEEMNGPFRGLTNLAS 211
Query: 393 LSLMHNPV 416
L L N +
Sbjct: 212 LRLDGNRI 219
>SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4)
Length = 267
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +3
Query: 222 PLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSL 401
P+LK + + + +GE L+ I L++++ T + + ++ TL + S
Sbjct: 131 PVLKNARLVPVPQGGTENMGE-LD--IKVLQNLLSTTSESTSNPSMEGCITLETSLSRSA 187
Query: 402 MHNPVANKNHYRAYVAFKMPELRLLDFR--KIKQKERDE 512
A N Y+ Y AFKMP RL + I + E+D+
Sbjct: 188 SKKTEAEVNKYKQYHAFKMPITRLRSHQILAINRAEQDK 226
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +3
Query: 108 ELDLRGYKIPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 284
ELDL K+ +++ L ++ ++N + L+GF L + + NN + + E
Sbjct: 53 ELDLSNNKLVKLQLQDVFLPSLTKLNLANNQLATLEGFTAFPNLVDLNITNNPKIEVSE 111
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 204 RKLDGFPLL--KRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTL 377
R+L FPL R +LLN+NR+ + + + N+ ++ L N I E+ + L
Sbjct: 100 RRLRNFPLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEI-EFGAFRNL 158
Query: 378 PKLRTLSLMHN 410
L +L L N
Sbjct: 159 TALESLYLFRN 169
>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
Length = 2057
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 647 LMDFLRCKICNFRIRHISTRYKGLC-FFSNLPLYFFPFSTLEQCIGFISLFLFNLPEV 477
LM F C +C +R R + T+Y+ + FF +P S L + +G +S L PE+
Sbjct: 176 LMAFGACALCRWRRRRM-TKYREITDFFEPIPRMASSPSPLYKSLGSLSGSLSTFPEL 232
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 306 NLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 410
NL ++IL+NN I + D + L LR LSL HN
Sbjct: 48 NLVTLILSNNEIIAI-DENAFQGLTSLRNLSLSHN 81
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 638 NP*DPRSNQECIIPTGGRTSDQNVAVWSDSRTKTFTACDT 757
N D ++ I TGG T+D+++ W+ S T + DT
Sbjct: 544 NSNDNNTSSSGIEATGGGTADRHIRFWNGSTGATLNSVDT 583
>SB_33731| Best HMM Match : Exonuc_X-T (HMM E-Value=6.2e-06)
Length = 275
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 78 MQYMNPCRDRELDLR-GYKI 134
M Y+NPC DRE L GYK+
Sbjct: 62 MSYINPCMDREKQLAGGYKV 81
>SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 216 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 395
G ++ R++ L I ++ E +E ++P+ S+I N+ L + ++ + KL T
Sbjct: 60 GSSIVTRMQATLCATRIIRKVPELMEIFVPSTRSLISERNHGVLLTGITLVTVMCKLNTE 119
Query: 396 SLMH 407
+L H
Sbjct: 120 TLQH 123
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +3
Query: 516 NALFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVER 695
N F+S ++ R IAK TF P + P + NL I A NA+S +
Sbjct: 273 NLKFESFSKDDLDRIIAKFLVTFTPDDDSPADPLANLR-NAIQGNVPASANATSNSTADS 331
Query: 696 LTRMLQSGQIPGQK 737
+ R G + G++
Sbjct: 332 VKRSAIKGMLYGEQ 345
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 261 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 410
N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N
Sbjct: 735 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 781
>SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05)
Length = 1200
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 276 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRA 440
+ E ++ L+ +IL NNI E G + L LP++ L L +N N +A
Sbjct: 818 VNEFCDNNSQKLKHLILPVNNIGERGCKELLGLLPQILVLDLGYNRRVNDECMKA 872
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 261 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 410
N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N
Sbjct: 310 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 356
>SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1820
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 432 NGFCWQLDCA*VIMFAALVMYLMDPNH--QVLRYCCLLKSQTLNLVYNVPNSLLSSRS 265
NGFCW C V F+ + + + P + V R ++K +++ + N + R+
Sbjct: 264 NGFCWSPSCLSVPYFSTALSWYLKPENIGHVRRLIEIIKQFRESILQTIANMRMGVRA 321
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Frame = -2
Query: 274 LTILLLFNRIHFN---LFSSGKPSSF 206
+T+LLLFN +H N L +SGKP +F
Sbjct: 1618 VTLLLLFNLVHTNERPLDNSGKPLTF 1643
>SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36)
Length = 852
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 252 LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 410
L+NNRI + + +L+++ L+ NNISE+ L + L +L L +N
Sbjct: 628 LSNNRITSVPVGMPCLATSLQTLNLSGNNISEVKTLAQFPS--SLSSLDLSNN 678
>SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11)
Length = 305
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 480 FRKIKQKERDEANALFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTNLTPQEIHKIREA 659
F KI + + +A L++ K K +RE + K N+ D + + P E + +
Sbjct: 113 FEKIAKAQLKKATKLYQQEKRKSEEREKKEAEKAQQREKNLEDARNITIKPDESLPVAKQ 172
Query: 660 IK 665
IK
Sbjct: 173 IK 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,916,855
Number of Sequences: 59808
Number of extensions: 503193
Number of successful extensions: 1266
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -