Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_C20
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette, s... 62 2e-09
AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat pr... 62 2e-09
AF308473-1|AAG33618.1| 283|Homo sapiens ATP-binding cassette ha... 62 2e-09
AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette ha... 62 2e-09
AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter prot... 62 2e-09
AB209054-1|BAD92291.1| 398|Homo sapiens ATP-binding cassette, s... 62 2e-09
AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC trans... 62 2e-09
AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens ... 36 0.15
AB065817-1|BAC06036.1| 312|Homo sapiens seven transmembrane hel... 31 5.6
>BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 6 protein.
Length = 842
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 8 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 67
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 68 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 125
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 126 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 185
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 186 FSLWVLRYVVSGGLFVLGLWAPGL 209
>AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat
protein.
Length = 842
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 8 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 67
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 68 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 125
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 126 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 185
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 186 FSLWVLRYVVSGGLFVLGLWAPGL 209
>AF308473-1|AAG33618.1| 283|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 283
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 62 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 121
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 122 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 179
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 180 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNNPQWWWARADLGQQVQ 239
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 240 FSLWVLRYVVSGGLFVLGLWAPGL 263
>AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 896
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 62 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 121
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 122 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 179
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 180 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 239
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 240 FSLWVLRYVVSGGLFVLGLWAPGL 263
>AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter
protein.
Length = 842
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 8 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 67
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 68 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 125
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 126 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 185
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 186 FSLWVLRYVVSGGLFVLGLWAPGL 209
>AB209054-1|BAD92291.1| 398|Homo sapiens ATP-binding cassette,
sub-family B, member 6 variant protein.
Length = 398
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 61 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 120
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 121 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 178
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 179 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 238
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 239 FSLWVLRYVVSGGLFVLGLWAPGL 262
>AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC
transporter 3 protein.
Length = 842
Score = 62.1 bits (144), Expect = 2e-09
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Frame = +1
Query: 58 CPPNVXLGALWVDHGISQCF---MEPVSAVFIGGFLLVLGTTQIVIYKSHATEVMDVRSS 228
C +G W+ G+S CF + P + + +G LVL + + + +
Sbjct: 8 CEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAG 67
Query: 229 KLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG-----YMVVALTVTLVVFPLSAYLA 393
+ LL + A + L L + G G Y+++A + + +L
Sbjct: 68 PRISPYVLQLLLATLQAALP--LAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLL 125
Query: 394 ILER-----RFLLPSVPPRGHGFVLLVFWAMIFVSENLSFLNINKEGWWWHLKNLQDRLE 558
++ER R + H LL+ W + F +ENL+ ++ N WWW +L +++
Sbjct: 126 VVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQ 185
Query: 559 MSLFVGRYVSCMIMFVLGMKAPGI 630
SL+V RYV +FVLG+ APG+
Sbjct: 186 FSLWVLRYVVSGGLFVLGLWAPGL 209
>AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32464 fis, clone SKNMC1000251, highly similar to
Homo sapiens MT-ABC transporter (MTABC) mRNA. ).
Length = 766
Score = 35.9 bits (79), Expect = 0.15
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 439 HGFVLLVFWAMIFVSENLSFLNINKEGWWW 528
H LL+ W + F +ENL+ ++ N WWW
Sbjct: 116 HSPGLLLLWTVAFAAENLALVSWNSPQWWW 145
>AB065817-1|BAC06036.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 313 KSGCVYGYMVVALTVTLVVFPLSAYLAILERRFLLPSVPPRGHGF 447
K +YG MV++ + V+ S+Y+ IL F LPS R F
Sbjct: 195 KINIIYGLMVISYIIVDVILIASSYVLILRAVFRLPSQDVRLKAF 239
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,525,058
Number of Sequences: 237096
Number of extensions: 2581554
Number of successful extensions: 8351
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8351
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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