Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_C20
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 0.73
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.96
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 1.7
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 2.2
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.8
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 6.8
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 6.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.0
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 9.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.0
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 9.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.0
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 25.0 bits (52), Expect = 0.73
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 232 LFGVQMFFTLLVPVLAVIR--FLLQALLFKSGCVYGYMVVALTVTLVVFPLSAYLAILER 405
LF V F + +LAV+R +L A + V V LVV P SA +LE
Sbjct: 54 LFSVATVFGNTLVILAVVRERYLHTATNY---FVTSLAFADCLVGLVVMPFSAIYEVLEN 110
Query: 406 RFL 414
R+L
Sbjct: 111 RWL 113
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 0.96
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 243 SDVFYSFSTSVGCNKVSVTSIIVQKWLCVWLYGS 344
S + Y TS+ S +I+++K +W Y S
Sbjct: 290 SQLEYDLQTSIMSRHYSTRAIVIEKGQSIWDYDS 323
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.8 bits (49), Expect = 1.7
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Frame = +1
Query: 154 LLVLGTTQIVIYKSHATEVMDVRSSKLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG 333
++VLG +++ H +++ +V + +F V + L+ LAV+ F +FK ++G
Sbjct: 78 MVVLGNVLVILAVYHTSKLRNV--TNMFIVSLAVADLMVGLAVLPFSATWEVFKVW-IFG 134
Query: 334 ------------YMVVALTVTLVVFPLSAYLAILERRFLLPSVPPRGHGFVLLVFWAMIF 477
+M A + L L YLA+ + PR ++ W + F
Sbjct: 135 DLWCSIWLAVDVWMCTASILNLCAISLDRYLAVTRPVSYPQIMSPRRARLLVATVWILSF 194
Query: 478 V 480
V
Sbjct: 195 V 195
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +1
Query: 562 SLFV---GRYVSCMIMFVLGMKAPGIMHHFD 645
S+FV G Y I FV GMK HH +
Sbjct: 173 SMFVHTFGAYFGLAISFVFGMKEKRKEHHLE 203
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 149 DSYWSWEPHKLLFTKAMPLR*WM 217
++Y+ W P K++ K +P W+
Sbjct: 143 NNYYIWHPGKIVNGKRVPPTNWV 165
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 576 SLRVVYDNVRARYEGA 623
+ RVV DN++ R++GA
Sbjct: 3 NFRVVGDNLKDRFDGA 18
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 576 SLRVVYDNVRARYEGA 623
+ RVV DN++ R++GA
Sbjct: 4 NFRVVGDNLKDRFDGA 19
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 149 DSYWSWEPHKLLFTKAMPLR*WM 217
++Y+ W P K++ K +P W+
Sbjct: 143 NNYYIWHPGKIVNGKRVPPTNWV 165
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +2
Query: 74 HLERXGWITAYHNVSWSPYLL 136
HLER W+ ++ +P L
Sbjct: 242 HLERKAWVASFGRPKMTPQSL 262
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 169 TTQIVIYKSHATEVMDVRSSKLFGVQ 246
T V +KSH TE + K +Q
Sbjct: 57 TPDSVFFKSHITEAFQTQCKKCTEIQ 82
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 410 SYYRPCLLEVTVLYSWFFGL 469
S+Y PC++ V + Y+ F L
Sbjct: 351 SFYIPCIIMVFLYYNIFKAL 370
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 169 TTQIVIYKSHATEVMDVRSSKLFGVQ 246
T V +KSH TE + K +Q
Sbjct: 57 TPDSVFFKSHITEAFQTQCKKCTEIQ 82
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 618 LHTEHEHYHTRHVTTDEQ 565
LH ++HYH V T ++
Sbjct: 4 LHIHYQHYHITPVFTKQK 21
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,019
Number of Sequences: 438
Number of extensions: 4888
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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