BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_C20 (725 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 0.73 DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.96 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 1.7 DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 2.2 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.8 AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 6.8 AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 6.8 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.8 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.0 DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 9.0 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.0 AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 9.0 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.0 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 25.0 bits (52), Expect = 0.73 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +1 Query: 232 LFGVQMFFTLLVPVLAVIR--FLLQALLFKSGCVYGYMVVALTVTLVVFPLSAYLAILER 405 LF V F + +LAV+R +L A + V V LVV P SA +LE Sbjct: 54 LFSVATVFGNTLVILAVVRERYLHTATNY---FVTSLAFADCLVGLVVMPFSAIYEVLEN 110 Query: 406 RFL 414 R+L Sbjct: 111 RWL 113 >DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 391 Score = 24.6 bits (51), Expect = 0.96 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = +3 Query: 243 SDVFYSFSTSVGCNKVSVTSIIVQKWLCVWLYGS 344 S + Y TS+ S +I+++K +W Y S Sbjct: 290 SQLEYDLQTSIMSRHYSTRAIVIEKGQSIWDYDS 323 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 23.8 bits (49), Expect = 1.7 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Frame = +1 Query: 154 LLVLGTTQIVIYKSHATEVMDVRSSKLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYG 333 ++VLG +++ H +++ +V + +F V + L+ LAV+ F +FK ++G Sbjct: 78 MVVLGNVLVILAVYHTSKLRNV--TNMFIVSLAVADLMVGLAVLPFSATWEVFKVW-IFG 134 Query: 334 ------------YMVVALTVTLVVFPLSAYLAILERRFLLPSVPPRGHGFVLLVFWAMIF 477 +M A + L L YLA+ + PR ++ W + F Sbjct: 135 DLWCSIWLAVDVWMCTASILNLCAISLDRYLAVTRPVSYPQIMSPRRARLLVATVWILSF 194 Query: 478 V 480 V Sbjct: 195 V 195 >DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. Length = 471 Score = 23.4 bits (48), Expect = 2.2 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = +1 Query: 562 SLFV---GRYVSCMIMFVLGMKAPGIMHHFD 645 S+FV G Y I FV GMK HH + Sbjct: 173 SMFVHTFGAYFGLAISFVFGMKEKRKEHHLE 203 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/23 (30%), Positives = 14/23 (60%) Frame = +2 Query: 149 DSYWSWEPHKLLFTKAMPLR*WM 217 ++Y+ W P K++ K +P W+ Sbjct: 143 NNYYIWHPGKIVNGKRVPPTNWV 165 >AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. Length = 136 Score = 21.8 bits (44), Expect = 6.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 576 SLRVVYDNVRARYEGA 623 + RVV DN++ R++GA Sbjct: 3 NFRVVGDNLKDRFDGA 18 >AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. Length = 135 Score = 21.8 bits (44), Expect = 6.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 576 SLRVVYDNVRARYEGA 623 + RVV DN++ R++GA Sbjct: 4 NFRVVGDNLKDRFDGA 19 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/23 (30%), Positives = 14/23 (60%) Frame = +2 Query: 149 DSYWSWEPHKLLFTKAMPLR*WM 217 ++Y+ W P K++ K +P W+ Sbjct: 143 NNYYIWHPGKIVNGKRVPPTNWV 165 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 9.0 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = +2 Query: 74 HLERXGWITAYHNVSWSPYLL 136 HLER W+ ++ +P L Sbjct: 242 HLERKAWVASFGRPKMTPQSL 262 >DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1 protein. Length = 116 Score = 21.4 bits (43), Expect = 9.0 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = +1 Query: 169 TTQIVIYKSHATEVMDVRSSKLFGVQ 246 T V +KSH TE + K +Q Sbjct: 57 TPDSVFFKSHITEAFQTQCKKCTEIQ 82 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +2 Query: 410 SYYRPCLLEVTVLYSWFFGL 469 S+Y PC++ V + Y+ F L Sbjct: 351 SFYIPCIIMVFLYYNIFKAL 370 >AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein protein. Length = 116 Score = 21.4 bits (43), Expect = 9.0 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = +1 Query: 169 TTQIVIYKSHATEVMDVRSSKLFGVQ 246 T V +KSH TE + K +Q Sbjct: 57 TPDSVFFKSHITEAFQTQCKKCTEIQ 82 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 21.4 bits (43), Expect = 9.0 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -3 Query: 618 LHTEHEHYHTRHVTTDEQ 565 LH ++HYH V T ++ Sbjct: 4 LHIHYQHYHITPVFTKQK 21 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 216,019 Number of Sequences: 438 Number of extensions: 4888 Number of successful extensions: 19 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22535775 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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