Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C18
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   1.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   7.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 673 EVLFLLLVHKFSIQVYWSTFP 611
           ++LFL+L   F + V+W  +P
Sbjct: 79  DLLFLILGLPFELSVFWQQYP 99


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 164 GQIDKPKGAFKNXYWPXIVTKDGDLXE 84
           G +  P+G F + Y P  +   GDL E
Sbjct: 357 GNVITPQGVFLSLYQPQGMNILGDLIE 383


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 145 FGLSICPKVFTXFISIIFRDLITRGI 222
           +G+SIC   F   ++++  +L  RG+
Sbjct: 279 YGVSICLVTFASALAVVTLNLHHRGV 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,284
Number of Sequences: 438
Number of extensions: 4232
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)