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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C15
         (789 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F8.10c |stg1||SM22/transgelin-like actin modulating protein...    69   8e-13
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual      68   1e-12
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ...    31   0.14 
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||...    29   0.57 
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy...    27   2.3  
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch...    26   5.4  
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3...    25   9.4  
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe...    25   9.4  

>SPAC4F8.10c |stg1||SM22/transgelin-like actin modulating protein
           Stg1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 174

 Score = 68.9 bits (161), Expect = 8e-13
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
 Frame = +2

Query: 140 EKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENI 319
           EKEA+EWIE  L  K        D L+ G +LC++  +    ++ +   +   F  MENI
Sbjct: 6   EKEAREWIEETLHTKLNAQLDLLDQLQSGVILCRICKEALGANI-RYKESNMPFVQMENI 64

Query: 320 TNF-QSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRESYRHAEWSGPCLGPKPA 496
           + F   A +   VP  D+FQT DL+E+++  QV+ ++ +  R + +        LGPK A
Sbjct: 65  SAFINYAQQVVHVPSQDMFQTSDLFERRNDEQVLRSIHSFSRYAAKMFPGKVRGLGPKLA 124

Query: 497 DECKRDFS-DEVLKAGQTVIGLQAGSNKGATQSGQNLGAGRK 619
           ++  R FS  +  +  + V  LQ GS    TQ  + +   R+
Sbjct: 125 EKKPRVFSAQQQREFREGVNSLQYGSFDMPTQGTEKIAFSRR 166


>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1489

 Score = 68.1 bits (159), Expect = 1e-12
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 131 LXKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGG-QFKM 307
           L +  EA++WIE  LG    P   FE  L++G VL  L+ K +P  + KI  +   QF+ 
Sbjct: 41  LCRVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRH 100

Query: 308 MENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 436
            +NI  F   I   G+P+I  F+  D++E K++ +V+  + AL
Sbjct: 101 SDNINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHAL 143


>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 962

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +2

Query: 146 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 325
           EA++W+E     ++   + F D L +G VLCQL  K  P      +    ++++ E  T 
Sbjct: 69  EAKKWLEEETNNEYQNLDDFVDALVNGKVLCQLAFKYYP---KLASNWKPRYQISERNTV 125

Query: 326 FQSA----IKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 436
           + +A    +   G+     F+T DL  + +I +V+  L AL
Sbjct: 126 YLNAFFHFLDFIGMFTPFRFETKDLVRRFNIPKVIYCLHAL 166


>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 992

 Score = 29.5 bits (63), Expect = 0.57
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
 Frame = -1

Query: 264 PGFSLLMSWQR----TVPSLRTSSNSSPGG--NLA-PRTPSIHSWASFSFXRVALGSDLS 106
           PG   L   QR    T P L TSS++ PGG  N+A   T S+   +S ++      + +S
Sbjct: 210 PGVGTLQQPQRAGSDTFPDLNTSSSNQPGGEPNVASANTHSLEILSSSAYHPSGSSNGIS 269

Query: 105 ANLT 94
           A LT
Sbjct: 270 AGLT 273


>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 922

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 65  SHNHTTCLWNVKFALRSLPS-----ATLXKEKEAQ-EWIEGVLGAKF-PPGELFEDVLKD 223
           S +HT  LW++K +   +P       TL  E+  Q ++ + VL  K  P G      L D
Sbjct: 496 SADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAVKISPDGRFVAASLLD 555

Query: 224 GTVLCQLINKLK 259
            TV    ++ LK
Sbjct: 556 NTVKVYYLDSLK 567


>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
            Slh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1935

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 113  SLPSATLXKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTV--LCQLINKLKPGSVPKIN 283
            SLP      EKEA++++    G K    EL++ +  D  V  +  L+N L   S PK+N
Sbjct: 1771 SLPGLNASSEKEARDYLNKFAGNK--TDELYQMLCNDPNVFDIESLVNSLI--SYPKMN 1825


>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 437

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 543 WPAFRTSSEKSRLHSSAGLGPRQGPLHSA 457
           WP FR+   +S L+ ++G  P   P +S+
Sbjct: 112 WPYFRSLRRESMLYHTSGSYPESQPPYSS 140


>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 886

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 753 YHFRVDIHKGLQSHISVHYHTNLYKIILKINITFCW 646
           Y++ V I + LQS+IS        K IL I    CW
Sbjct: 202 YNWWVSILRRLQSNISTSERITYTKAILAIAKHHCW 237


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,198,954
Number of Sequences: 5004
Number of extensions: 68421
Number of successful extensions: 176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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