Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_C12
(572 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 128 9e-29
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 127 2e-28
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 91 1e-17
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 88 1e-16
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 85 8e-16
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 85 8e-16
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 79 1e-13
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 78 1e-13
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 77 2e-13
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 69 8e-11
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 67 3e-10
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 66 7e-10
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 65 1e-09
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 64 2e-09
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 63 4e-09
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 63 5e-09
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 62 1e-08
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 62 1e-08
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 60 4e-08
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 59 6e-08
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 59 6e-08
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 59 8e-08
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 58 1e-07
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 58 1e-07
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 57 3e-07
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 57 3e-07
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 57 3e-07
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 57 3e-07
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 56 4e-07
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 56 4e-07
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 56 4e-07
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 56 4e-07
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 56 6e-07
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 55 1e-06
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 53 4e-06
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 53 6e-06
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 53 6e-06
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 52 1e-05
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 52 1e-05
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 51 2e-05
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 48 2e-04
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 47 3e-04
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 47 3e-04
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 47 4e-04
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 46 6e-04
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 43 0.004
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 43 0.006
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 43 0.006
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 39 0.096
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.13
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 38 0.22
UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4; Thermo... 38 0.22
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 36 0.51
UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1; Metallosph... 35 1.2
UniRef50_Q8SUZ9 Cluster: Similarity to 60S RIBOSOMAL PROTEIN L24... 33 4.8
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 32 8.3
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 128 bits (309), Expect = 9e-29
Identities = 58/100 (58%), Positives = 68/100 (68%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 220
M LC++SG KIYPGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 221 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 340
KGQ EE I GASL+DIMAKRN KPEV
Sbjct: 61 KGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 127 bits (307), Expect = 2e-28
Identities = 57/100 (57%), Positives = 69/100 (69%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 220
M LC++SG KIYPGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 221 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 340
KGQ EE I GASL++I+AKRN KPEV
Sbjct: 61 KGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 91.5 bits (217), Expect = 1e-17
Identities = 43/93 (46%), Positives = 54/93 (58%)
Frame = +2
Query: 59 AYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 238
++SG KIYPG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEE 66
Query: 239 XXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPE 337
IVGASL I +R+ +PE
Sbjct: 67 VAKKRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = +2
Query: 119 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGAS 298
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE + GAS
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGAS 66
Query: 299 LSDIMAKRNMKPEV 340
L +I+AKRN KPEV
Sbjct: 67 LDNILAKRNQKPEV 80
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 85.4 bits (202), Expect = 8e-16
Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK---G 226
C YSG KI+PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K KK G
Sbjct: 6 CVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHG 65
Query: 227 QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 325
QE+ + G SL I+AKRN
Sbjct: 66 QEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRN 98
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 85.4 bits (202), Expect = 8e-16
Identities = 41/94 (43%), Positives = 53/94 (56%)
Frame = +2
Query: 59 AYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 238
++SG KIYPG G V+ D K F F NSK + R+NPR++ WTVL+R+ KKG EE
Sbjct: 7 SFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEE 66
Query: 239 XXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 340
I GASL I +R++KPEV
Sbjct: 67 VAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 164 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 340
M+RNPRKVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 78.2 bits (184), Expect = 1e-13
Identities = 39/100 (39%), Positives = 50/100 (50%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 220
M LC YS KIYP G V+ D K F F+N+K E+ + NPR + W+++YRR +K
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYK 60
Query: 221 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 340
+ IVGASL I KR KPEV
Sbjct: 61 NTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 77.4 bits (182), Expect = 2e-13
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 232
LC +SG KIYPG G ++ D + F FLNSKC+ + P K+ WT +YR++ KK
Sbjct: 7 LCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAA 66
Query: 233 EEXXXXXXXXXXX-XXXXIVGASLSDIMAKRNMKPEV 340
+E IVGA+L I KR KPEV
Sbjct: 67 QEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 68.9 bits (161), Expect = 8e-11
Identities = 32/91 (35%), Positives = 47/91 (51%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 232
LC +S K+YPG G V+ DG+TF FL+ K + H + +TWT ++RRK +KG
Sbjct: 7 LCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRKGAY 66
Query: 233 EEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 325
+ +VG SL++I RN
Sbjct: 67 AKAARVRTKRTTRKMKAVVGMSLAEINRIRN 97
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 232
+CA+SG KI G+ V++D K+FTF+N K L + NPRKV WT +YR+ KKGQ+
Sbjct: 7 VCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNKKGQQ 66
Query: 233 EE 238
E
Sbjct: 67 NE 68
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 65.7 bits (153), Expect = 7e-10
Identities = 31/90 (34%), Positives = 45/90 (50%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 235
C ++ ++YPG GK V DGK + F+N K A H + P K+ W + +R+ KK Q E
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTE 76
Query: 236 EXXXXXXXXXXXXXXXIVGASLSDIMAKRN 325
IVG SL D+ +KR+
Sbjct: 77 LFNRKRSKKTSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/90 (35%), Positives = 47/90 (52%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 232
LC++S +IYPGHG+ V DG+ F +LN K A + +++ WTV +RR KK +
Sbjct: 7 LCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKKIKT 66
Query: 233 EEXXXXXXXXXXXXXXXIVGASLSDIMAKR 322
+E IVG SL +I +R
Sbjct: 67 DEGAKKRRIRNLKVQRAIVGISLEEIRRRR 96
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +2
Query: 50 GLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQ 229
G C++ +IYPG G+ + DG+ F FL K + L + +K+TWT+ RR +KK +
Sbjct: 6 GTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVK 65
Query: 230 EEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNM 328
+ IVG SL +I ++N+
Sbjct: 66 ATDIAQKKKKRNVTVARAIVGISLEEINRRKNL 98
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 63.3 bits (147), Expect = 4e-09
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 208
C + G IYPGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 6 CYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKG 226
C++ G +I PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKA 66
Query: 227 QEEE 238
QE +
Sbjct: 67 QESQ 70
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQ 229
LC+YS +IYPG G+ V DG+ TFLN KC + + P K+ W+V +RR KK
Sbjct: 12 LCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKKLTN 71
Query: 230 EEEXXXXXXXXXXXXXXXIVGASLSDIMAKR 322
+ I G SL DI KR
Sbjct: 72 QGATSKRRNKKTVRLHKAIEGLSLDDIKQKR 102
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C + +YPGHG V+ D K F F SKC M+RNPRKV WT YR+ K
Sbjct: 6 CYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGK 61
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + KIYPGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 6 CYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 59.3 bits (137), Expect = 6e-08
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C Y IYPGHG ++ D + F F SKC + NPRKV WT +YR++ K
Sbjct: 6 CWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERNK 61
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C Y IYPGHG V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 11 CWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 58.8 bits (136), Expect = 8e-08
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 235
C + IYPGHG V+ D K F F SKC M+RNPRKV WT +R K +
Sbjct: 6 CWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTK 65
Query: 236 E 238
+
Sbjct: 66 D 66
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 57.2 bits (132), Expect = 3e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C + +YPGHG V+ D K F F +KC ++NPRK+ WT YR+ K
Sbjct: 6 CYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHGK 61
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 6 CYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C+YSG KI PG+GK M + D FLN K +L + NPRK+ WT+ RR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 6 CYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 56.4 bits (130), Expect = 4e-07
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 235
C++S +IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 13 CSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVE 72
Query: 236 EXXXXXXXXXXXXXXXIVGASLSDIMAKR 322
+ G S+ DI ++
Sbjct: 73 ATQRRRYKKTIKVQKAVCGLSVEDIRNRK 101
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 56.4 bits (130), Expect = 4e-07
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 235
C++S +IYPG G+ + DGK + +L+SK + L ++ K+ WT +RR KK + E
Sbjct: 13 CSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVE 72
Query: 236 EXXXXXXXXXXXXXXXIVGASLSDIMAKR 322
+ G S+ DI ++
Sbjct: 73 ATQRRRYKKTIKVQKAVCGLSVEDIRNRK 101
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 56.4 bits (130), Expect = 4e-07
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
M C IYPGHG V+ D K F F SKC + NPRK+ WT YRR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 56.4 bits (130), Expect = 4e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C++ G I+PGHG V+ D K F F SKC + ++NPRK +WT +R K
Sbjct: 7 CSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 56.0 bits (129), Expect = 6e-07
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 208
C++ +YPG G V+ D + F F SKC M+RNPRKV WT YR
Sbjct: 7 CSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + +YPGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 6 CYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 53.2 bits (122), Expect = 4e-06
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + YPG G V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 6 CFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 211
M +C++ G I PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 1 MEKRVCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKV----DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C +S ++PGHG+ V TF KC A ++ ++NPR + WT YRR +K
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRK 65
Query: 224 GQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPE 337
+ IVGA LS I R + E
Sbjct: 66 TTTDRVNRRRAARAVRVQRAIVGADLSYIQEVRAARKE 103
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 52.8 bits (121), Expect = 6e-06
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + IYPGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 6 CYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/56 (42%), Positives = 27/56 (48%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C IYPGHG V+ D K F F SKC + NPRK+ WT RR K
Sbjct: 6 CWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGK 61
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/56 (41%), Positives = 27/56 (48%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C + IY GHG V+ D K F F KC R NPRKV WT + R+ K
Sbjct: 6 CWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANK 61
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 208
C + +YP G V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 6 CHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 208
C + YP G V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 6 CHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
C + IYPGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 6 CYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 208
C + G I PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 7 CDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
+C +SG + GHG+ ++ D F + K +RNPRK+ WT YR KK
Sbjct: 7 ICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 223
C + G + PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 211
C++ G +I PG G V+ DG F +SKC + L R+P+K WT Y +
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPKKYKWTTRYMK 59
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 42.7 bits (96), Expect = 0.006
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKFKKGQE 232
C+Y G I PG+G V+VDG F + +C + + M +NP+K W RR Q
Sbjct: 6 CSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAKSAAQS 65
Query: 233 E 235
+
Sbjct: 66 K 66
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 42.7 bits (96), Expect = 0.006
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 235
C Y G I PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 38.7 bits (86), Expect = 0.096
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 53 LCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 211
+C + G IYPGHG V F F ++KC+ + + + + WT+ + +
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCKKLKKIGKTNKGLKWTIKFSK 55
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2
Query: 125 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 208
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 37.5 bits (83), Expect = 0.22
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 205
C + + G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L24e -
Thermoplasma acidophilum
Length = 67
Score = 37.5 bits (83), Expect = 0.22
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 205
C++ G I PG G V+ DG F ++KC + + R PR V WT Y
Sbjct: 7 CSFCGKAIEPGTGIMYVRKDGAILYFCSNKCRKNMIELNRVPRYVKWTNEY 57
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 36.3 bits (80), Expect = 0.51
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 205
C + + G G K DG F +SKC +++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
L24E - Metallosphaera sedula DSM 5348
Length = 61
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 CAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 211
C++ G I P G V+ DG F ++KC L ++ +K+ WT Y R
Sbjct: 7 CSFCGGDIPPATGMMHVRNDGTILWFCSNKCRKYMLKYHKDAKKLKWTTSYSR 59
>UniRef50_Q8SUZ9 Cluster: Similarity to 60S RIBOSOMAL PROTEIN L24;
n=1; Encephalitozoon cuniculi|Rep: Similarity to 60S
RIBOSOMAL PROTEIN L24 - Encephalitozoon cuniculi
Length = 113
Score = 33.1 bits (72), Expect = 4.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 41 MXXGLCAYSGXKIYPGHGKXMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 220
M G+ +SG I G G V DG+ ++K + NPR + WT R F
Sbjct: 14 MIQGVSMFSGRNIPKGSGIYEVMSDGRAVLTASNKERRLIARKINPRDIRWTTSSREFFG 73
Query: 221 K 223
K
Sbjct: 74 K 74
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 32.3 bits (70), Expect = 8.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 202 QDSPCYFTRIPPHQMGGFTF*IQECEGFSI 113
+DSP Y RIPP ++ F F I++ E F +
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,202,303
Number of Sequences: 1657284
Number of extensions: 6867368
Number of successful extensions: 12585
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 12390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12581
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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