Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C09
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   211   4e-55
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   211   5e-55
Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical ...    29   4.8  
AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical ...    28   6.3  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  211 bits (516), Expect = 4e-55
 Identities = 98/194 (50%), Positives = 131/194 (67%)
 Frame = +3

Query: 180 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 359
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 360 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 539
            K+  DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C  
Sbjct: 61  IKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG 118

Query: 540 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 719
             +  C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N T
Sbjct: 119 -DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPT 177

Query: 720 YIQNLNNLXRFVLV 761
           Y +NL +L   VLV
Sbjct: 178 YKRNLLSLKNLVLV 191


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  211 bits (515), Expect = 5e-55
 Identities = 98/194 (50%), Positives = 131/194 (67%)
 Frame = +3

Query: 180 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 359
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 360 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 539
            K+  DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C  
Sbjct: 61  IKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG 118

Query: 540 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 719
             +  C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N T
Sbjct: 119 -DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINNENNNNPT 177

Query: 720 YIQNLNNLXRFVLV 761
           Y +NL +L   VLV
Sbjct: 178 YKRNLLSLKNLVLV 191


>Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical
           protein C31H5.6 protein.
          Length = 446

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +3

Query: 336 NLQVEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQH 506
           ++ VEY  + +     LS   N++G  QG  F   +V     + PQIK +VS+ G H
Sbjct: 211 DVDVEYFLKPIEFVLGLSYTTNMLGI-QGVSFGATIVDLLSTRYPQIKAVVSINGPH 266


>Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical
           protein F33H1.5 protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 739 LFKFCIYVLLTVLTLLMSARNTLFA--SYVRSSKGSCQYVA 623
           LF F I+ LLT +  L++ + T+F+  S      G C+YV+
Sbjct: 65  LFNFAIFDLLTCVASLLACQKTIFSGLSLTYIFHGPCKYVS 105


>AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical
           protein Y43F4B.5a protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 582 YAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNL 743
           YA YN +  + LV++TYW  P  E T +  S   AD+     + +  + ++ +L
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIGEAEVASVRDL 503


>AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical
           protein E03H12.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 748 LXRLFKFCIYVLLTVLTLLMSARNTLFASYVRSSKGSCQYVA*TSEF 608
           L   F FC +++  +L L  S    LF  Y  S    C+    TS F
Sbjct: 27  LSMFFSFCFFIISIILELNASVNMLLFWGYPASDTKFCEPQLKTSTF 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,369,256
Number of Sequences: 27780
Number of extensions: 374608
Number of successful extensions: 810
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)