Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_C06
(763 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 24 1.5
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 24 1.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.6
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 6.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 6.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.1
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 8.1
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 8.1
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 324 FPFLLMYSYLFSGTTFRI 271
F FL++ + L SGTTF++
Sbjct: 80 FTFLMVVAVLSSGTTFKL 97
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 324 FPFLLMYSYLFSGTTFRI 271
F FL++ + L SGTTF++
Sbjct: 80 FTFLMVVAVLSSGTTFKL 97
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 540 TGV-PKNVQDFNPHNPE 587
TGV P + +DF P+NP+
Sbjct: 736 TGVSPGDYKDFKPNNPD 752
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 171 KPEVCHLLXDYLEAIK 218
+PE HLL DY++ K
Sbjct: 167 QPEALHLLVDYMKKNK 182
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 171 KPEVCHLLXDYLEAIK 218
+PE HLL DY++ K
Sbjct: 481 QPEALHLLVDYMKKNK 496
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 171 KPEVCHLLXDYLEAIK 218
+PE HLL DY++ K
Sbjct: 714 QPEALHLLVDYMKKNK 729
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 171 KPEVCHLLXDYLEAIK 218
+PE HLL DY++ K
Sbjct: 714 QPEALHLLVDYMKKNK 729
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 8.1
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -2
Query: 315 LLMYSYLFSGTTFRIYILNNYF 250
+++ S + +GT + IY+ + Y+
Sbjct: 48 VVLVSIIAAGTAYSIYVRHTYY 69
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 8.1
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -2
Query: 315 LLMYSYLFSGTTFRIYILNNYF 250
+++ S + +GT + IY+ + Y+
Sbjct: 48 VVLVSIIAAGTAYSIYVRHTYY 69
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,729
Number of Sequences: 336
Number of extensions: 3782
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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