Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C06
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    44   1e-04
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835...    29   5.3  
03_02_0427 + 8367633-8368205,8369318-8369809,8370602-8370817,837...    28   7.1  
08_01_0815 - 7914634-7914740,7915262-7915357,7922268-7922328,792...    28   9.3  

>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
 Frame = +3

Query: 315 GRGREKGDPAEALIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCD 494
           G    K +   AL  F++   L    A + AG++    G     +RD   G  C +K+ +
Sbjct: 150 GAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEG-----RRDEAVG--CYQKAAE 202

Query: 495 QNDDMACHYLSGMYLTGVPKNVQD----FNPHNPEKNKNIDYL----------IKPDKKE 632
               +    L   YL   P   ++    F P     N    Y           IK +++E
Sbjct: 203 LGHPVGMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQRE 262

Query: 633 AFRFAKRACELGNMFACANVSLMYKKGDGVEKNQDESXRFFEI 761
           A ++  RA E GN+ A  N+SL Y  G+G  ++Q  S R+ ++
Sbjct: 263 AAKWYLRAAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQL 305


>11_04_0145 +
           14082864-14082946,14083060-14083267,14083383-14083599,
           14084170-14084276,14085521-14085674,14086848-14087029
          Length = 316

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 384 DPGACLHAGMLLTATGPGVN-IQRDVPKGYNCLKKSCDQ 497
           D G C +  M  +      N IQRD  KGY C  K  DQ
Sbjct: 254 DGGHCKNENMFYSRVDVHANLIQRDFMKGYTCWVKHGDQ 292


>03_02_0427 +
           8367633-8368205,8369318-8369809,8370602-8370817,
           8371914-8372237,8372991-8373233,8374056-8374250
          Length = 680

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
 Frame = +3

Query: 444 IQRDVPKGYNCLKKSCDQNDDMACHYLSGMYLTGVPKNVQDFNPHNPEKNKNIDYLIKPD 623
           ++RD  K Y+   K+ ++ D  A   L  +Y  G             E+N          
Sbjct: 276 VRRDYGKAYHWFSKAVEKGDTRAMELLGEIYARGA----------GVERNYT-------- 317

Query: 624 KKEAFRFAKRACELGNMFACANVSLMYKKGDGVE-KNQDESXRFFEI 761
             EA+++   A +     A   +  +Y KG GVE KN  ++  FFEI
Sbjct: 318 --EAYKWLTLAAKQQQYSAYNGLGYLYVKGYGVEKKNLTKAKEFFEI 362


>08_01_0815 -
           7914634-7914740,7915262-7915357,7922268-7922328,
           7922365-7923621
          Length = 506

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 558 VQDFNPHNPEKNKNIDYLIKPDKKEAFRFAKRACELGNMFAC 683
           VQ  NPH    NK +   +KP     F+   +    G+ F C
Sbjct: 321 VQKKNPHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVC 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,690,556
Number of Sequences: 37544
Number of extensions: 377357
Number of successful extensions: 759
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)