Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C06
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-4|CAA93779.1|  249|Caenorhabditis elegans Hypothetical pr...   143   1e-34
Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical pr...    38   0.008
U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.        38   0.008
U50828-1|AAC47112.1|  685|Caenorhabditis elegans sel-1 protein.        38   0.008
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    31   0.68 
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z69904-4|CAA93779.1|  249|Caenorhabditis elegans Hypothetical
           protein ZK20.4 protein.
          Length = 249

 Score =  143 bits (347), Expect = 1e-34
 Identities = 74/224 (33%), Positives = 127/224 (56%), Gaps = 4/224 (1%)
 Frame = +3

Query: 93  LKKEDEVKDYIENIGIEYRFGCYKEQKPEVCHLLXDYLEAIKKDFEKAAKVYKSNCLEYK 272
           ++++ E  +Y++NIGIEYRFGCY+E++PE C LL +Y+EA++++F+ A  ++K NC E  
Sbjct: 10  MQEQAERAEYVKNIGIEYRFGCYEEKRPESCQLLGEYMEALQQNFQAAVAIFKKNCDENS 69

Query: 273 FGKSCLKIGNYTLIGRGREKGDPAEALIYFEKGCELNDPGACLHAGMLLTATGPGVNIQR 452
           + KSC K G Y L G+  +    ++ +   +  C+ N P  C +  + L       + + 
Sbjct: 70  YPKSCFKYGMYMLAGKVGDDASLSKMIRPMKIACDANIPQGCRY--LSLVHWNGEKDRKA 127

Query: 453 DVPKGYNCLKKSCDQNDDMACHYLSGMYLTGVPKNVQDFNPHNPEKNKNIDYL----IKP 620
           D  K    ++++C+  D  AC  LS  Y+     N + F  +   + K +D      +  
Sbjct: 128 DSEKAERYMRRACELEDGEACWLLSTWYM----GNKEKFKTNAAGEAKELDRAELGSLSR 183

Query: 621 DKKEAFRFAKRACELGNMFACANVSLMYKKGDGVEKNQDESXRF 752
           D  ++ +FA RACE+    +CANVS M+K GDGV K+ D++ ++
Sbjct: 184 DMDKSLQFAIRACEMDIPQSCANVSRMFKLGDGVPKDLDQAKKY 227


>Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical
           protein F45D3.5 protein.
          Length = 685

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 34/137 (24%), Positives = 59/137 (43%)
 Frame = +3

Query: 351 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 530
           L Y++   +  D  A L  G +  A G G+N  ++    +  L  + +     A  YL  
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334

Query: 531 MYLTGVPKNVQDFNPHNPEKNKNIDYLIKPDKKEAFRFAKRACELGNMFACANVSLMYKK 710
           MYL G P   +D+        K+ +YL+K            + +  +  A A +  MY K
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375

Query: 711 GDGVEKNQDESXRFFEI 761
           G GV+KN +++ +   +
Sbjct: 376 GKGVKKNYEKALKLLTL 392


>U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.
          Length = 685

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 34/137 (24%), Positives = 59/137 (43%)
 Frame = +3

Query: 351 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 530
           L Y++   +  D  A L  G +  A G G+N  ++    +  L  + +     A  YL  
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334

Query: 531 MYLTGVPKNVQDFNPHNPEKNKNIDYLIKPDKKEAFRFAKRACELGNMFACANVSLMYKK 710
           MYL G P   +D+        K+ +YL+K            + +  +  A A +  MY K
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375

Query: 711 GDGVEKNQDESXRFFEI 761
           G GV+KN +++ +   +
Sbjct: 376 GKGVKKNYEKALKLLTL 392


>U50828-1|AAC47112.1|  685|Caenorhabditis elegans sel-1 protein.
          Length = 685

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 34/137 (24%), Positives = 59/137 (43%)
 Frame = +3

Query: 351 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 530
           L Y++   +  D  A L  G +  A G G+N  ++    +  L  + +     A  YL  
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334

Query: 531 MYLTGVPKNVQDFNPHNPEKNKNIDYLIKPDKKEAFRFAKRACELGNMFACANVSLMYKK 710
           MYL G P   +D+        K+ +YL+K            + +  +  A A +  MY K
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375

Query: 711 GDGVEKNQDESXRFFEI 761
           G GV+KN +++ +   +
Sbjct: 376 GKGVKKNYEKALKLLTL 392


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 498 NDDMACHYLSGMYLTGVPKNVQDFNPHNPEKNKNIDYL-IKPDKKEAFRFA 647
           NDD + HY + +Y     KNV  FN  N      + YL  KP+  E   +A
Sbjct: 46  NDDGSLHYAAFLYANPPMKNVMKFNLFNVTNPDEVKYLGAKPELIEVGGYA 96


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +3

Query: 177 EVCHLLXDYLEAIKKDFEKAAKVYKSNCLEYKFGKSCLKIGN-YTLIGRGREKG-DPAEA 350
           EVC +  +YL+ + +DF +  +V +S   +     S   IGN  TL+   R KG +P + 
Sbjct: 145 EVCAVNCEYLDKVNEDFWRCLQVERS-LSKPGHDYSKFAIGNKKTLLEDPRTKGIEPRDV 203

Query: 351 LIYFEKGCELNDPGACLHAG 410
           L+ F K    +D   C   G
Sbjct: 204 LLDFYKNWYSSDIMTCCIVG 223


>Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +3

Query: 120 YIENIGIEYRFGCYKEQKPEVCHLLXDYLEAIKKDFEKAAKVYKSNCLEYKFGKSCLKIG 299
           +++N  ++  F C+  + PE+   L D+      + EK AK+        K  +   ++ 
Sbjct: 70  FLKNNQLDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKI------TIKTTQLLAEVD 123

Query: 300 NYTLIGRGREKG 335
           N TLI    EKG
Sbjct: 124 NKTLINVVFEKG 135


>Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +3

Query: 120 YIENIGIEYRFGCYKEQKPEVCHLLXDYLEAIKKDFEKAAKVYKSNCLEYKFGKSCLKIG 299
           +++N  ++  F C+  + PE+   L D+      + EK AK+        K  +   ++ 
Sbjct: 70  FLKNNQLDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKI------TIKTTQLLAEVD 123

Query: 300 NYTLIGRGREKG 335
           N TLI    EKG
Sbjct: 124 NKTLINVVFEKG 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,988,017
Number of Sequences: 27780
Number of extensions: 358745
Number of successful extensions: 756
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)