Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C06
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 324 REKGDPAEALIYFEKGCELN 383
           RE  DP   L YF +  ELN
Sbjct: 212 REYNDPEYKLDYFMEDVELN 231


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 328 SLPLPINV*LPIFRHDFPNLYSKQLLLY 245
           S   P++  L  F ++ PN+  K +L+Y
Sbjct: 646 SFGFPLDKPLYDFNYEGPNMLFKDILIY 673


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 328 SLPLPINV*LPIFRHDFPNLYSKQLLLY 245
           S   P++  L  F ++ PN+  K +L+Y
Sbjct: 646 SFGFPLDKPLYDFNYEGPNMLFKDILIY 673


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 324 REKGDPAEALIYFEKGCELN 383
           RE  DP   L YF +  ELN
Sbjct: 212 REYNDPEYKLDYFMEDVELN 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,700
Number of Sequences: 438
Number of extensions: 4608
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)