Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C04
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.68 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 224 SITADLTKESDIEKIIKKTIDHYGKLD 304
           S T+D  +E+D E ++KK +D   +L+
Sbjct: 851 SPTSDKAQEADGEVVVKKEVDEEERLE 877


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 378 RRSYWAKEVFSMVPVSII 325
           +RS+WA  +F ++  S+I
Sbjct: 135 KRSFWAVTIFLVLAASVI 152


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 349 EHLLGPV*SSYEHQCAFNLLSDD 417
           EHLLG + +    Q  FN+ S D
Sbjct: 133 EHLLGHLQTDLMGQSIFNITSPD 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,710
Number of Sequences: 336
Number of extensions: 2905
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)