Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C02
         (811 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1; ...    38   0.30 
UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis ...    35   2.8  
UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1...    34   4.9  
UniRef50_Q8IE32 Cluster: Putative uncharacterized protein MAL13P...    34   4.9  
UniRef50_Q97E45 Cluster: Transcriptional regulator, AcrR family;...    33   8.5  
UniRef50_A5Z9W8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  
UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY0393...    33   8.5  
UniRef50_Q4YB06 Cluster: SAM-dependent methyltransferase related...    33   8.5  
UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;...    33   8.5  

>UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar israelensis ATCC
           35646|Rep: Putative uncharacterized protein - Bacillus
           thuringiensis serovar israelensis ATCC 35646
          Length = 269

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 417 FPHESVKITLQDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENN 560
           FP    K+ +QD+    KV +  VN+ + +    KEL+K  + +VEN+
Sbjct: 61  FPDYGFKLLIQDKKDPKKVEIDKVNYQKLSTEDKKELMKQTFTEVENS 108


>UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis
           SJ95|Rep: Sensor protein - Petrotoga mobilis SJ95
          Length = 918

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +3

Query: 432 VKITLQDESIKNKVRVIMV---NFSRCTIPKNKELVKNIYLDVENNEDLKGKKSVY 590
           ++ TL+ ++IK +   ++V   NF    IP N +L  +IY  +E N+++ G  SVY
Sbjct: 223 IENTLEGKAIKERSSYMLVGRENFQNYFIPFNIDLKSSIYSVIEQNDEVYGVLSVY 278


>UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1;
           Chlorobium tepidum TLS|Rep: hypothetical protein CT1981
           - Chlorobium tepidum TLS
          Length = 415

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 168 DAWPFIRD-EIEIEIGSRQLVCIPHITEADLYKVTSLFVPNEKEINGKNFTPLG 326
           +A PF  D + E   GS  +V +PH  E D      L + +E E  G+NF+ LG
Sbjct: 205 EALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAGLNISSEIESGGENFSDLG 258


>UniRef50_Q8IE32 Cluster: Putative uncharacterized protein
           MAL13P1.155; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.155 -
           Plasmodium falciparum (isolate 3D7)
          Length = 1152

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +3

Query: 363 EDYVKWLEDGDFQDIDFKFPHESVKITLQDESIK-NKVRVIMVNFSRCT--IPKNKELVK 533
           +DY K+++D  ++D D     +  K++ QDE    N +    + F   T    K +E++ 
Sbjct: 186 KDYDKYIDDDKYEDYDKYIDDDYYKLSDQDELRDINIIYNECITFFLKTHQFLKEEEIIN 245

Query: 534 NIYLDVENNEDLKGKKSVYMITDVLMAKTIE 626
           N Y + ENN DL     +Y     L  K  E
Sbjct: 246 NFYFNSENN-DLDVDVEMYFFNKRLKKKYSE 275


>UniRef50_Q97E45 Cluster: Transcriptional regulator, AcrR family;
           n=1; Clostridium acetobutylicum|Rep: Transcriptional
           regulator, AcrR family - Clostridium acetobutylicum
          Length = 205

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 14/42 (33%), Positives = 29/42 (69%)
 Frame = +3

Query: 447 QDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENNEDLK 572
           +D+S+K  +++IM++     + KNKE+ K ++ +++  EDLK
Sbjct: 84  KDKSLKEVLKLIMIDRIEL-LEKNKEIFKIVFTEIQYQEDLK 124


>UniRef50_A5Z9W8 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 460

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +3

Query: 441 TLQDESIK-NKVRVIMVNFSRCTIPKNKELVKNIYLDVENNEDLKGKKSVYMITDV 605
           T  DES K N VR++++N +  T+  +K + K   L++   E+ K KKS+    D+
Sbjct: 56  TTNDESKKDNTVRIVILNNNYITMHYSKFVAKASVLNIYFGENFKNKKSIKKQIDI 111


>UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY03936;
            n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY03936 - Plasmodium yoelii yoelii
          Length = 1554

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +3

Query: 375  KWLEDGDFQDIDFKFPHESVKITLQDESIKNKVRVIMVNFSR-CTIPKNKELVKNIYLDV 551
            K +++ + ++++ +   ++ +     E  K  + V+ +N  + C   K +E +K  +++ 
Sbjct: 1021 KKVKNNNIENVETEKIDQNDEYDKSTEIRKKLIDVVQINLGKECFRIKIQENLKIKFINE 1080

Query: 552  ENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRI 659
            + N+  KG  S+YMITD  +    +F   + +  +I
Sbjct: 1081 QMNQKEKGICSIYMITDTNILINFDFNCMLDTLEKI 1116


>UniRef50_Q4YB06 Cluster: SAM-dependent methyltransferase related to
           tRNA(Uracyl-5-)- methyltransferase, putative; n=4;
           Plasmodium|Rep: SAM-dependent methyltransferase related
           to tRNA(Uracyl-5-)- methyltransferase, putative -
           Plasmodium berghei
          Length = 673

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = +3

Query: 456 SIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENNEDLKGK--KSVYMITDVLMAKTIEF 629
           S+ N    I++NF  CT+    E  KN+ +++ NN  +K K  K +    +    K I+ 
Sbjct: 360 SVSNSENQILINFIGCTL--TNEAKKNM-INIANNLAIKNKSIKGILYNVETNKLKQIKK 416

Query: 630 RVTIGSSSRIFHLGN 674
            +T+   + I+H  N
Sbjct: 417 EITLFGQNYIYHTYN 431


>UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;
           Plasmodium falciparum 3D7|Rep: DNA repair endonuclease,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 1516

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 447 QDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVEN-NEDLKGKKSVYMITDV 605
           +D+   N+VR    N+    + KNKE + NIYLD ++  ED++ K  VY   D+
Sbjct: 306 KDKENINEVRRDQKNY----VYKNKENINNIYLDDDDEKEDIQNKNGVYNNDDI 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,773,403
Number of Sequences: 1657284
Number of extensions: 13482729
Number of successful extensions: 31858
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31852
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)