Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C02
         (811 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533504-1|CAG38535.1|  323|Homo sapiens DKFZP566A1524 protein.        32   2.8  
BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance ...    32   2.8  
BC038971-1|AAH38971.1|  323|Homo sapiens family with sequence si...    32   2.8  
AL136704-1|CAB66639.1|  323|Homo sapiens hypothetical protein pr...    32   2.8  
AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein.         32   2.8  
AC104623-1|AAY24282.1|  323|Homo sapiens unknown protein.              32   2.8  
AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein.              32   2.8  

>CR533504-1|CAG38535.1|  323|Homo sapiens DKFZP566A1524 protein.
          Length = 323

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 426 ESVKITLQDESIKNKVRVIMVNFS--RCTIPKNKELVKNIYLDVEN--NEDLKGKKSVYM 593
           E +  TL+ + +K +   I  +FS  R TI +N+  + N++LD+EN  N ++  + S++ 
Sbjct: 133 EILHFTLRFDELKMRNPAIQNDFSYYRRTISRNR--INNMHLDIENEVNNEMANRMSLFY 190

Query: 594 ITDVLMAKTI 623
                M KT+
Sbjct: 191 AEATPMLKTL 200


>BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance of
           chromosomes 6 protein.
          Length = 1091

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 423 HESVKI-TLQDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENNED 566
           H+SV I TL+DE+ +NK ++ MV        +N E +K++ ++ EN  D
Sbjct: 733 HQSVDIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYD 781


>BC038971-1|AAH38971.1|  323|Homo sapiens family with sequence
           similarity 49, member A protein.
          Length = 323

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 426 ESVKITLQDESIKNKVRVIMVNFS--RCTIPKNKELVKNIYLDVEN--NEDLKGKKSVYM 593
           E +  TL+ + +K +   I  +FS  R TI +N+  + N++LD+EN  N ++  + S++ 
Sbjct: 133 EILHFTLRFDELKMRNPAIQNDFSYYRRTISRNR--INNMHLDIENEVNNEMANRMSLFY 190

Query: 594 ITDVLMAKTI 623
                M KT+
Sbjct: 191 AEATPMLKTL 200


>AL136704-1|CAB66639.1|  323|Homo sapiens hypothetical protein
           protein.
          Length = 323

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 426 ESVKITLQDESIKNKVRVIMVNFS--RCTIPKNKELVKNIYLDVEN--NEDLKGKKSVYM 593
           E +  TL+ + +K +   I  +FS  R TI +N+  + N++LD+EN  N ++  + S++ 
Sbjct: 133 EILHFTLRFDELKMRNPAIQNDFSYYRRTISRNR--INNMHLDIENEVNNEMANRMSLFY 190

Query: 594 ITDVLMAKTI 623
                M KT+
Sbjct: 191 AEATPMLKTL 200


>AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein.
          Length = 1091

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 423 HESVKI-TLQDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENNED 566
           H+SV I TL+DE+ +NK ++ MV        +N E +K++ ++ EN  D
Sbjct: 733 HQSVDIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYD 781


>AC104623-1|AAY24282.1|  323|Homo sapiens unknown protein.
          Length = 323

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 426 ESVKITLQDESIKNKVRVIMVNFS--RCTIPKNKELVKNIYLDVEN--NEDLKGKKSVYM 593
           E +  TL+ + +K +   I  +FS  R TI +N+  + N++LD+EN  N ++  + S++ 
Sbjct: 133 EILHFTLRFDELKMRNPAIQNDFSYYRRTISRNR--INNMHLDIENEVNNEMANRMSLFY 190

Query: 594 ITDVLMAKTI 623
                M KT+
Sbjct: 191 AEATPMLKTL 200


>AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein.
          Length = 1091

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 423 HESVKI-TLQDESIKNKVRVIMVNFSRCTIPKNKELVKNIYLDVENNED 566
           H+SV I TL+DE+ +NK ++ MV        +N E +K++ ++ EN  D
Sbjct: 733 HQSVDIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYD 781


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,941,111
Number of Sequences: 237096
Number of extensions: 1989698
Number of successful extensions: 7217
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7217
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)