Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C01
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 581 SVLNYMIYTRGSSVDYNNWKAM 646
           SVLN +   + S +D N WK +
Sbjct: 483 SVLNLLSVIKSSFLDINTWKML 504


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 681 GSTSSQPQPSFPIA 640
           G+TS +P P  P+A
Sbjct: 76  GTTSPEPDPEIPVA 89


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 595 VIEYT*TSNYFASGPVTLFVFKTSTIFIRWFRFVAP 488
           +I+ T  S  F+ GPV + +   + +FI+    + P
Sbjct: 93  IIDKTKISFNFSQGPVKIMLQNATDLFIKSLESLKP 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,800
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)