Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C01
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...   112   2e-24
AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase p...    75   2e-13
X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for ...    31   3.4  
BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase p...    31   3.4  
AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase p...    31   3.4  
AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathio...    31   3.4  
AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione r...    31   3.4  
AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathio...    31   3.4  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score =  112 bits (269), Expect = 2e-24
 Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
 Frame = +2

Query: 194 LFLLLPGIGTQFANPINSLLNFVTEGTKQLDSEPPDQRNLLSEYDFIIVGAGTAGCVLAN 373
           ++ LL G+G   A    +L    + G + L S   + R+   EY +++VGAG+AGCVLA 
Sbjct: 1   MWCLLRGLGRPGALARGALGQQQSLGARALASAGSESRD---EYSYVVVGAGSAGCVLAG 57

Query: 374 RLSEIQDWKILLVEAGTNE--------NYLMDIP--IVANYLQFTAANWGYKTKPSNKYC 523
           RL+E    ++LL+EAG  +        ++ + +P  +VAN       NW Y T+      
Sbjct: 58  RLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCD-DRYNWCYHTEVQR--- 113

Query: 524 AGFENKQCNWPRGKVVGGSSVLNYMIYTRGSSVDYNNWKAMGNDGWGWDDVLPYFKKIEN 703
            G + +   WPRG+V GGSS LN M+Y RG + DY  W+  G  GW +   LPYF+K + 
Sbjct: 114 -GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQG 172

Query: 704 YNIPSFDDPXYHGHDGYLNV 763
           + + +     Y G DG L V
Sbjct: 173 HELGA---SRYRGADGPLRV 189


>AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase
           protein.
          Length = 482

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 34/80 (42%), Positives = 46/80 (57%)
 Frame = +2

Query: 524 AGFENKQCNWPRGKVVGGSSVLNYMIYTRGSSVDYNNWKAMGNDGWGWDDVLPYFKKIEN 703
           AG + +   WPRG+V GGSS LN M+Y RG + DY  W+  G  GW +   LPYF+K + 
Sbjct: 1   AGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQG 60

Query: 704 YNIPSFDDPXYHGHDGYLNV 763
           + + +     Y G DG L V
Sbjct: 61  HELGA---SRYRGADGPLRV 77


>X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for
           glutathione reductase (EC 1.6.4.2). ).
          Length = 479

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 12  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 43


>BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase
           protein.
          Length = 522

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 55  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 86


>AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase
           protein.
          Length = 479

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 12  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 43


>AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 55  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 86


>AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione
           reductase protein.
          Length = 479

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 12  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 43


>AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 PPDQRNLLSEYDFIIVGAGTAGCVLANRLSEI 388
           PP     ++ YD++++G G+ G   A R +E+
Sbjct: 55  PPPAAGAVASYDYLVIGGGSGGLASARRAAEL 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,930,206
Number of Sequences: 237096
Number of extensions: 2376609
Number of successful extensions: 4523
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4520
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)