Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C01
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...   118   6e-27
Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical pr...    34   0.096
AC006768-1|AAF60576.2|  433|Caenorhabditis elegans Hypothetical ...    34   0.096
AJ561206-1|CAD99208.1|   71|Caenorhabditis elegans NAS-13 protei...    28   6.3  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score =  118 bits (283), Expect = 6e-27
 Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
 Frame = +2

Query: 332 IIVGAGTAGCVLANRLSEIQDWKILLVEAGTNEN---YLMDIPIVANY-LQFTAANWGYK 499
           IIVGAG+AGCVLANRL+E    ++LL+EAG  ++   + + +P    Y L     NW Y 
Sbjct: 41  IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYH 100

Query: 500 TKPSNKYCAGFENKQCNWPRGKVVGGSSVLNYMIYTRGSSVDYNNWKAMGNDGWGWDDVL 679
           T           N+   WPRG+V GGSS LN M Y RG + DYN W+  G  GW + + L
Sbjct: 101 TTAQKN----LGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCL 156

Query: 680 PYFKKIENYNIPSFDDPXYHGHDGYLNV 763
           PYFKK E Y+  +  +  Y G++G L V
Sbjct: 157 PYFKKAETYSDATGPNDPYRGNNGPLYV 184


>Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical
           protein K02E11.7 protein.
          Length = 135

 Score = 34.3 bits (75), Expect = 0.096
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = +2

Query: 416 AGTNENYLMDIPIVANYLQFTAANWGYKTKPSNKYCAGFENKQCNW-----PRGKVVGGS 580
           A  N+N  + +PI +NY +     +G K +   + C G   K C +      + KVV G 
Sbjct: 35  AAFNDNVTIPMPISSNYRRIVEPTYGVKEEQLYRVCNGKNKKTCGYWENIQTKAKVVAGK 94

Query: 581 SVLN 592
           +  N
Sbjct: 95  TTYN 98


>AC006768-1|AAF60576.2|  433|Caenorhabditis elegans Hypothetical
           protein Y45G12B.3 protein.
          Length = 433

 Score = 34.3 bits (75), Expect = 0.096
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 287 SEPPDQRNLLSEYDFIIVGAGTAGCVLANR-LSEIQDWKILLVE 415
           S PP +   L +YD +IVG G  GC  A + L E    K+ L+E
Sbjct: 14  SGPPKKSVDLPKYDLVIVGGGIVGCATARQLLIEKPQLKVALIE 57


>AJ561206-1|CAD99208.1|   71|Caenorhabditis elegans NAS-13 protein
           protein.
          Length = 71

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +2

Query: 227 FANPINSLLNFVTEGTKQ----LDSEPPDQRNLLSEYDFIIVG 343
           F +P+   L+F T+ +K      D   P+Q  +L++YD+ ++G
Sbjct: 15  FISPVFCFLHFFTDCSKLCSIFFDPSIPEQETVLTDYDYNMIG 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,708,079
Number of Sequences: 27780
Number of extensions: 384753
Number of successful extensions: 930
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)