Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_C01
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.   121   8e-30
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   3.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   9.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score =  121 bits (291), Expect = 8e-30
 Identities = 60/147 (40%), Positives = 79/147 (53%)
 Frame = +2

Query: 323 YDFIIVGAGTAGCVLANRLSEIQDWKILLVEAGTNENYLMDIPIVANYLQFTAANWGYKT 502
           YDFI+VG G A  V+A RLSE+ +WK+LL+EAG +E    +IP           +W Y T
Sbjct: 69  YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIPSNLQLYLGGDLDWKYYT 128

Query: 503 KPSNKYCAGFENKQCNWPRGKVVGGSSVLNYMIYTRGSSVDYNNWKAMGNDGWGWDDVLP 682
              +  C       C WPRGK +GG+++ + M Y RG   DY  W   G  GW WD+V+P
Sbjct: 129 TNESHACLS-TGGSCYWPRGKNLGGTTLHHGMAYHRGHRKDYERWVQQGAFGWSWDEVMP 187

Query: 683 YFKKIENYNIPSFDDPXYHGHDGYLNV 763
           Y+ K EN    S     YH   G +NV
Sbjct: 188 YYLKSENNTELSRVGTKYHRSGGLMNV 214


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 627 ITIGRRWETMAGVGTTYSRIL 689
           IT+ R     AGVGT + R+L
Sbjct: 296 ITVHRNSAQQAGVGTIFDRVL 316


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 627 ITIGRRWETMAGVGTTYSRIL 689
           IT+ R     AGVGT + R+L
Sbjct: 296 ITVHRNSAQQAGVGTIFDRVL 316


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 365 LANRLSEIQDWKILLVEAGTNE 430
           LAN ++ I +WK L  + G++E
Sbjct: 31  LANSMNVIHEWKYLDYDFGSDE 52


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 130 THLNYENESLLCAEGSGGAV 189
           TH++++ E   C E + GAV
Sbjct: 195 THIDWQPEDEECTEATAGAV 214


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 742 PVVLWVIKGRYVVILYFLKIREYVVPTPAIVSH 644
           P + W + G+ +     L++ +YV     +VSH
Sbjct: 423 PEITWELDGKRLSNTERLQVGQYVTVNGDVVSH 455


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 221 TQFANPINSLLNFVTEGTK 277
           T FAN  NS L+ VTE  K
Sbjct: 121 TFFANDKNSFLHDVTERNK 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,068
Number of Sequences: 438
Number of extensions: 5007
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)