Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B23
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 83 3e-16
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 69 3e-12
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 59 4e-09
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 58 7e-09
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 53 2e-07
06_01_0080 + 644021-645463 30 1.6
04_03_0515 + 16698589-16701066 29 3.8
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 29 5.0
05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468 29 5.0
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230... 29 5.0
03_01_0110 - 865605-866004,866094-866712,867659-867863 29 5.0
01_06_1543 - 38138253-38138855,38139000-38139239 29 5.0
01_06_0663 - 30991390-30992340 29 5.0
11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135 28 6.6
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 28 6.6
06_01_1076 - 8778210-8778734 28 8.7
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 82.6 bits (195), Expect = 3e-16
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
Frame = +3
Query: 75 IGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLL-RGELK 251
+G++G+G +G A L A+ G V + D ++ A++ I L L G L + +
Sbjct: 13 VGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCE 72
Query: 252 AS-EQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXX 428
S EQ +C+ +L + A V E + E+ D+KKK+F LD + + I
Sbjct: 73 HSIEQIKCVSSVQEL----RDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSI 128
Query: 429 XXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSL 608
QVI H NPP + L+EI+ T EV K + E +G + V
Sbjct: 129 SITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVKSFSERLG-KTVIC 187
Query: 609 TREIDGFVLNRIQYAILDEV-WRL 677
+++ GF++NRI +++E W L
Sbjct: 188 SQDYPGFIVNRILMPMINEAFWAL 211
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 69.3 bits (162), Expect = 3e-12
Identities = 48/194 (24%), Positives = 87/194 (44%)
Frame = +3
Query: 63 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 242
K K+ I+G GL+G A Y V + +V K + I+ IK L + G +
Sbjct: 313 KVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTE 372
Query: 243 ELKASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXX 422
E + + + G D K V E V EN+ LK+++F +L+ + +
Sbjct: 373 E-RYEKAMSLVTGVLDYER-FKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTS 430
Query: 423 XXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPV 602
E + K +++ +H +P + +PL+EIV T P+V ++ ++I + P+
Sbjct: 431 TIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPI 490
Query: 603 SLTREIDGFVLNRI 644
+ GF +NR+
Sbjct: 491 -VVGNCTGFAVNRM 503
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 58.8 bits (136), Expect = 4e-09
Identities = 50/213 (23%), Positives = 88/213 (41%)
Frame = +3
Query: 3 FTRGLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITD 182
F + L+ T + K K+ ++G GL+G A V + +V + +
Sbjct: 288 FAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQR 347
Query: 183 AIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKK 362
+ I L L G L + K ++ +KG+ D + K V E V E + LK+
Sbjct: 348 GQKMIAANLEGLVKRGSLTKD-KMNKAMSLLKGALDYSD-FKDVDMVIEAVIEKIPLKQS 405
Query: 363 VFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWT 542
+F +L+ V + I E + ++I +H +P + +PL+EIV T
Sbjct: 406 IFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKT 465
Query: 543 KPEVAKKTREIMEEIGQQPVSLTREIDGFVLNR 641
P+ + + I + PV + GF +NR
Sbjct: 466 SPQAILDLITVGKMIKKVPV-VVGNCTGFAVNR 497
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 58.0 bits (134), Expect = 7e-09
Identities = 45/191 (23%), Positives = 82/191 (42%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK 251
K+ IVG GL+G A S V + +V + + I +K L +L G + E
Sbjct: 313 KVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKE-D 371
Query: 252 ASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXX 431
+ + G D + V + E V E+L LK+K+F +L+ N I
Sbjct: 372 YENKLSLLSGVLDYEQFREADVVI-EAVIEDLSLKQKIFADLEKYCHSNCILATNTSTID 430
Query: 432 XXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLT 611
+ + ++ +H +P + +PL+EI+ T +V + ++I + P+ +
Sbjct: 431 LHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRKTPI-VV 489
Query: 612 REIDGFVLNRI 644
GF +NR+
Sbjct: 490 GNCTGFAVNRM 500
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 53.2 bits (122), Expect = 2e-07
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Frame = +3
Query: 63 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 242
K K+ IVG GL+G A Y V + +V K + I+ IK L + +G +
Sbjct: 309 KVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTK 368
Query: 243 ELKAS-----------EQFQCIK---GSTDLATAVKGAVFVQE---CVPENLDLKKKVFQ 371
E+ E+F+ + ++ + F+++ V EN+ +K++VF
Sbjct: 369 EIYEKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQVFA 428
Query: 372 NLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPE 551
+L+ + + E + ++ +H +P + +PL+EIV + T P+
Sbjct: 429 DLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQ 488
Query: 552 VAKKTREIMEEIGQQPVSLTREIDGFVLNRI 644
V ++ ++I + PV + GF +NR+
Sbjct: 489 VVVDLLDVGKKIKKTPV-VVGNCTGFAVNRM 518
>06_01_0080 + 644021-645463
Length = 480
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQ 206
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++ K +
Sbjct: 5 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVE 49
>04_03_0515 + 16698589-16701066
Length = 825
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 423 YLLNLIISCYRQLRCRDSGTPFF 355
Y N++I+CYR+ R D G P F
Sbjct: 190 YTYNILINCYRRARRPDLGLPVF 212
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 522 IVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLN 638
++PAPW K K +E + ++GQ + + I+G +N
Sbjct: 504 VLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVN 542
>05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468
Length = 898
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 447 EGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQ 593
E L H V+ + PV+ +VE+ P TK +A+K M+E GQ
Sbjct: 745 EMLDHLESVLANEPVSVKSGQFIVEVKPQGVTKGLIAEKVLTSMKEKGQ 793
>05_05_0252 -
23621592-23621912,23621958-23622317,23622979-23623059,
23623262-23623633
Length = 377
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 522 IVPAPWTKPEVAKKTREIMEEIGQQPVSLT 611
IVPAPW++P K + I+++ G+ + T
Sbjct: 282 IVPAPWSRPLSEKVIKAILKDNGETKTTTT 311
>03_01_0110 - 865605-866004,866094-866712,867659-867863
Length = 407
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 486 PVNPPYYVPL---VEIVPAPWTKPE 551
PV PP Y+ L ++VP PW +PE
Sbjct: 317 PVKPPTYLRLNSKAQLVPNPWRQPE 341
>01_06_1543 - 38138253-38138855,38139000-38139239
Length = 280
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 528 PAPWTKPEVAKKTREIMEEIGQQPV 602
PAP P+VAKK +E++E+ G PV
Sbjct: 84 PAPGA-PDVAKKAKELLEQAGFGPV 107
>01_06_0663 - 30991390-30992340
Length = 316
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQ 173
++ VG+G++G+S A + GY +TVY+ A +
Sbjct: 21 RVAWVGTGVMGQSMAGHLLAAGYALTVYNRTASK 54
>11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135
Length = 464
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -1
Query: 593 LSDLFHNFPGFLSNFRLSPGCWDNFNKGYVIRWIHRMRNNDL 468
++D+ N PG +S FR+ W + N+ +++W + N +
Sbjct: 211 ITDVLDNHPGPVSYFRVDSTTWTDDNQ--LVKWFETLSNKSV 250
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +3
Query: 30 VASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQL 209
V+ST +A +K+ ++G+G IG ++ +G +VTV + + + +I+ Q
Sbjct: 222 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVEFASDIVPSMDGEIRKQF 281
Query: 210 HTL 218
+
Sbjct: 282 QRM 284
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 486 PVNPPYYVPL---VEIVPAPWTKPE 551
PV PP Y+ L ++VP PW +PE
Sbjct: 115 PVKPPTYLRLNSKPQLVPNPWRQPE 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,867,232
Number of Sequences: 37544
Number of extensions: 389460
Number of successful extensions: 1228
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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