Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B23
(728 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase, put... 80 2e-15
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 71 1e-12
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 66 3e-11
At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase NAD-bi... 36 0.028
At4g14820.1 68417.m02279 pentatricopeptide (PPR) repeat-containi... 31 0.78
At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family... 31 0.78
At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family... 31 0.78
At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carot... 31 1.0
At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carot... 31 1.0
At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille prot... 29 2.4
At1g56000.1 68414.m06425 amine oxidase-related contains Pfam pro... 29 3.2
At1g55980.1 68414.m06421 expressed protein 29 3.2
At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family... 29 4.2
At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family... 29 4.2
At3g51620.1 68416.m05658 expressed protein 29 4.2
At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family... 29 4.2
At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containi... 28 5.5
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu... 28 5.5
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 28 5.5
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 28 7.3
At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase NAD-bi... 28 7.3
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi... 28 7.3
At3g54660.1 68416.m06048 gluthatione reductase, chloroplast near... 27 9.6
>At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase,
putative similar to S(+)-beta-hydroxybutyryl CoA
dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase)
[Paracoccus denitrificans] GI:12003356; contains Pfam
profiles PF02737: 3-hydroxyacyl-CoA dehydrogenase NAD
binding, PF00725: 3-hydroxyacyl-CoA dehydrogenase
C-terminal
Length = 294
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/201 (26%), Positives = 96/201 (47%)
Frame = +3
Query: 69 EKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGEL 248
+ +G+VG+G +G A L A+ G V + D ++ A I + + GL+ E+
Sbjct: 5 KSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISKEV 64
Query: 249 KASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXX 428
+ ++ +++L + V E + E+ D+KKK+F++LD + + I
Sbjct: 65 -GDDAMHRLRLTSNLEDLCSADIIV-EAIVESEDIKKKLFKDLDGIAKSSAILASNTSSI 122
Query: 429 XXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSL 608
+ SQVI H +NPP + LVEI+ T E T+ + E G+ V
Sbjct: 123 SITRLASATRRPSQVIGMHFMNPPPIMKLVEIIRGADTSEETFLATKVLAERFGKTTV-C 181
Query: 609 TREIDGFVLNRIQYAILDEVW 671
+++ GFV+NRI +++E +
Sbjct: 182 SQDYAGFVVNRILMPMINEAF 202
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 70.5 bits (165), Expect = 1e-12
Identities = 50/194 (25%), Positives = 89/194 (45%)
Frame = +3
Query: 63 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 242
K +K+ I+G GL+G A Y V + +V K + I +K L + G +
Sbjct: 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQ 370
Query: 243 ELKASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXX 422
E K + +KGS D + + V E V EN+ LK+++F +L+ + I
Sbjct: 371 E-KFEKTMSLLKGSLDYES-FRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428
Query: 423 XXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPV 602
E K + +++ +H +P + +PL+EIV T +V ++ ++I + PV
Sbjct: 429 TIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPV 488
Query: 603 SLTREIDGFVLNRI 644
+ GF +NR+
Sbjct: 489 -VVGNCTGFAVNRM 501
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 65.7 bits (153), Expect = 3e-11
Identities = 46/191 (24%), Positives = 88/191 (46%)
Frame = +3
Query: 69 EKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGEL 248
+K+ ++G GL+G A +V + ++ ++ + I+ ++ + +L + G L +
Sbjct: 310 KKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLTQD- 368
Query: 249 KASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXX 428
KA + KG D T V E V EN+ LK+ +F+ ++ V + I
Sbjct: 369 KAGKALSLFKGVLDY-TEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTSTI 427
Query: 429 XXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSL 608
E K +++ +H +P + +PL+EIV + T +V + + I + PV +
Sbjct: 428 DLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVVV 487
Query: 609 TREIDGFVLNR 641
I GF +NR
Sbjct: 488 GNCI-GFAVNR 497
>At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 334
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 9 RGLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 158
R ++ T++S +I S + KIG +G+G++GRS GY VTV++
Sbjct: 21 RSMASSTISSDIITPS---NTKIGWIGTGVMGRSMCGHLIKAGYTVTVFN 67
>At4g14820.1 68417.m02279 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 722
Score = 31.1 bits (67), Expect = 0.78
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 392 VNYAVEILEHLFFKVKILWNTFLNKYCSF 306
+NYA + + + + + WNT + +YC F
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRF 190
>At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIK 200
+IG+ G ++G++ A+ A G+ ++VY+ ++ + +E K
Sbjct: 7 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK 49
>At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIK 200
+IG+ G ++G++ A+ A G+ ++VY+ ++ + +E K
Sbjct: 7 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK 49
>At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYD 158
K+ I+G+GL G S A+ G++V +YD
Sbjct: 58 KVAIIGAGLAGMSTAVELLDQGHEVDIYD 86
>At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYD 158
K+ I+G+GL G S A+ G++V +YD
Sbjct: 58 KVAIIGAGLAGMSTAVELLDQGHEVDIYD 86
>At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille protein
(ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE
protein) {Arabidopsis thaliana}; contains Pfam profiles
PF02171: Piwi domain, PF02170: PAZ domain
Length = 988
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 522 IVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNR 641
I+PAPW K K ++ + ++GQ + + I+G ++R
Sbjct: 515 ILPAPWLKYHENGKEKDCLPQVGQWNMMNKKMINGMTVSR 554
>At1g56000.1 68414.m06425 amine oxidase-related contains Pfam
profile PF01593: amine oxidase, flavin-containing
Length = 384
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 48 MASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 158
M+S + K+ ++GSG+ G A A G VT++D
Sbjct: 14 MSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 50
>At1g55980.1 68414.m06421 expressed protein
Length = 464
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 48 MASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 158
M+S + K+ ++GSG+ G A A G VT++D
Sbjct: 152 MSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 188
>At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 191
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLD 47
>At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 191
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLD 47
>At3g51620.1 68416.m05658 expressed protein
Length = 755
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 447 EGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREID 623
+ L+ +S +S P+ PP PL + P W + E A TREI+E++ VS R D
Sbjct: 6 DDLEEESSSSLSPPLLPPPRSPLNQ--PELWMRVEEA--TREIIEQVHPTLVSEDRRRD 60
>At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 191
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLD 47
>At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 893
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +3
Query: 486 PVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEE------IGQQPVSLTREIDGFV 632
P +P Y+ L ++ KPE+A+KTR +M E +G+ V + ++ FV
Sbjct: 728 PSDPALYILLADLYDESG-KPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFV 781
>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
putative similar to cytosine-5 methyltransferase (METII)
[Arabidopsis thaliana] GI:6523846; contains Pfam
profiles PF01426: BAH domain, PF00145: C-5
cytosine-specific DNA methylase
Length = 1404
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 96 LIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG-ELKASEQFQC 272
LI R W ++ + + ++ A++ + +ED++ + E D + + E++ ++ +
Sbjct: 520 LINRIWGEFYSIYSPEDPLEEIGAEEEFEEVEDVEEEDENEEEDTIQKAIEVQKADTLKK 579
Query: 273 IKGS-TDLATAVKGAVFVQECVPENL 347
I+GS ++ +G + + C E L
Sbjct: 580 IRGSCKEMEIRWEGEILGETCAGEPL 605
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 45 IMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLEN 224
+MAS K GI+G G +G + ++G+ VTV K+ +AIE + + + +
Sbjct: 178 LMASGLKG---GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSS 234
Query: 225 D 227
D
Sbjct: 235 D 235
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 480 SHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIM 578
SHP PP VPL +P P +P+ +T +M
Sbjct: 51 SHPSLPPLPVPLPLPLPQPQPQPQQDNETGHLM 83
>At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 318
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVY 155
+IG +G G++G + + GY VTVY
Sbjct: 36 RIGWIGIGIMGSAMVSHIIAAGYSVTVY 63
>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein contains Pfam
profile: PF03446 NAD binding domain of
6-phosphogluconate
Length = 299
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 72 KIGIVGSGLIGRSWAMLFASVGYQVTVY 155
+IG +G G++G + + GY VTVY
Sbjct: 15 RIGWIGIGIMGSAMVSHILAAGYSVTVY 42
>At3g54660.1 68416.m06048 gluthatione reductase, chloroplast nearly
identical to SP|P42770 Glutathione reductase,
chloroplast precursor (EC 1.8.1.7) (GR) (GRASE)
{Arabidopsis thaliana}; identical to cDNA glutathione
reductase GI:451197
Length = 565
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 63 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIK 200
K +KI IVG G I +A +F + +V V+ K + ED++
Sbjct: 259 KPKKIAIVGGGYIALEFAGIFNGLNCEVHVFIRQKKVLRGFDEDVR 304
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603,314
Number of Sequences: 28952
Number of extensions: 327965
Number of successful extensions: 1041
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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