Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B21
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.12 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.49 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.5  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 541 PSSSVNTATSMAALLETPEPIGTSDTTTIS 452
           P SS  +ATS A +   P PI T +   IS
Sbjct: 103 PGSSTTSATSGAVMASPPMPITTDNVAAIS 132


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = -2

Query: 364 MVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ*STCSPMRLTRPGA 185
           +++ +   N   DA + +   T +     TTT         TKPS   T  P+ +T+P  
Sbjct: 138 ILSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQ 197

Query: 184 AA--ATSGRLPYATMN 143
           A   AT G    AT++
Sbjct: 198 APPFATVGANLQATVS 213


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 42  IVITKEI*IFCVKIMNC 92
           +++   I +FCVK+ NC
Sbjct: 305 LIVNTWISLFCVKVTNC 321


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 390 PEWANYIKGVIANFPIKVN 446
           PE+ N+IKGV+ +  + +N
Sbjct: 368 PEYLNFIKGVVDSEDLPLN 386


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 220 TCSPMRLTRPGAAAATSGRLPYATMN---LSVACRNNTPSPFGIA 95
           T   M LTRP      +G+ PY  ++     VA   +TPS + ++
Sbjct: 153 TAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASWHTPSMYPLS 197


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 220 TCSPMRLTRPGAAAATSGRLPYATMN---LSVACRNNTPSPFGIA 95
           T   M LTRP      +G+ PY  ++     VA   +TPS + ++
Sbjct: 45  TAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASWHTPSMYPLS 89


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 104 RYRFAIHYFNTKYLYFFCYHNPV 36
           R R   + F+T Y+  + +H PV
Sbjct: 54  RIRTIYNQFSTPYVGIYIFHQPV 76


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 544 SPSSSVNTATSMAALLETP 488
           SPS++  T T+ +AL  TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 544 SPSSSVNTATSMAALLETP 488
           SPS++  T T+ +AL  TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,011
Number of Sequences: 336
Number of extensions: 4310
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)