SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B21
         (740 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0566 + 34760991-34761186,34761283-34761455,34762370-347624...    82   4e-16
06_03_1297 + 29110432-29110542,29110613-29110804,29110893-291109...    73   3e-13
02_01_0326 - 2230617-2230735,2231430-2231493,2231646-2231849,223...    72   6e-13
04_04_1091 - 30798420-30798584,30798870-30799045,30799127-307992...    53   2e-07
12_01_0810 + 7429834-7429960,7430534-7430696,7430796-7430844,743...    33   0.31 
05_05_0080 - 22243175-22243226,22243342-22243389,22243485-222435...    31   0.96 
12_02_1015 + 25331667-25332169,25333305-25333406,25333775-253339...    30   1.7  
10_05_0069 + 8782535-8782920,8783016-8783281,8783588-8783869,878...    30   2.2  
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816...    30   2.2  
10_08_0117 + 14942478-14942628,14943247-14943315,14943701-149438...    29   2.9  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   2.9  
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28...    29   2.9  
06_01_0586 - 4203024-4203425,4203527-4203595,4203681-4203746,420...    28   6.8  
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565...    28   6.8  
02_05_1338 + 35790726-35791862                                         28   6.8  
01_07_0251 + 42289617-42291241,42291424-42292156                       28   6.8  
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181...    28   9.0  
06_01_0659 - 4798974-4799219                                           28   9.0  

>03_06_0566 +
           34760991-34761186,34761283-34761455,34762370-34762416,
           34762546-34762640,34762734-34762816,34763331-34763399,
           34763874-34764059,34764374-34764508,34764774-34764908,
           34765148-34765218,34765393-34765470,34765626-34765767,
           34765940-34766050
          Length = 506

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 73/210 (34%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
 Frame = +3

Query: 123 LRQATDRFIVAYGRRPEVAAAAPGRVNLIGEHVDYCEGF-VLPVAIPFLTVVVGSYNNTD 299
           L +  D+F   Y  RP + A +PGRVNLIGEH+DY EG+ VLP+AI    +V        
Sbjct: 43  LARLADKFHAVYAARPALFARSPGRVNLIGEHIDY-EGYSVLPMAIRQDMIVAIRRAEGK 101

Query: 300 VCRVITVLASGEELEASFPATIKAELRPGQPEWANYI----KGVIANFPIK------VNG 449
             RV  V    +     +PA    E+     +W +Y     KGV      K        G
Sbjct: 102 EVRVANV--DDKYPICVYPADPDKEIDIKNHKWGHYFMCGYKGVYEYCRSKGIDMGGPVG 159

Query: 450 FDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGLTGRMVSLVEKAKL-CQKAEHDFPGMPCG 626
            D+VV   VP GSG+SSSAA   +    + G+  +     E A+  CQ   H   G   G
Sbjct: 160 LDVVVDGTVPTGSGLSSSAAFVCSATIAIMGVLEKNFPKKEVAQFTCQSERH--IGTQSG 217

Query: 627 IMDQYIVTMGKKDHALLIDCKSLEAKQVPI 716
            MDQ I  M K   A LID   + A  V +
Sbjct: 218 GMDQAISIMAKPGFAELIDFNPIHATDVQL 247


>06_03_1297 +
           29110432-29110542,29110613-29110804,29110893-29110976,
           29111115-29111191,29111410-29111476,29111640-29111697,
           29111823-29111890,29111981-29112043,29112549-29112651,
           29112685-29112845,29112934-29113053,29113300-29113356,
           29113646-29113809,29113896-29114055,29114720-29114803,
           29115074-29115196,29115368-29115498,29115577-29115658,
           29115876-29115963,29116143-29116186,29116264-29116387,
           29116450-29116537,29116649-29116849,29116894-29117104,
           29117383-29117454,29117587-29117790,29117959-29118087
          Length = 1021

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = +3

Query: 381 PGQPEWANYIKGVI----ANFPIK-VNGFDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGL 545
           P Q +WA Y+ G I        +K  +   I+V SDVP G GVSSSA++EVA    +   
Sbjct: 605 PSQ-KWAAYVAGTILVLMTELDVKFTDSMSILVSSDVPEGKGVSSSASVEVATMAAIAAA 663

Query: 546 TGRMVSLVEKAKLCQKAEHDFPGMPCGIMDQYIVTMGKKDHALLIDCK 689
            G  ++  + A LCQK E+   G PCG+MDQ     G+ +  L + C+
Sbjct: 664 YGLNIAPRDLALLCQKVENHVVGAPCGVMDQMTSACGEANKLLAMVCQ 711


>02_01_0326 -
           2230617-2230735,2231430-2231493,2231646-2231849,
           2231945-2232016,2232293-2232458,2232543-2232758,
           2232873-2232949,2233056-2233151,2233237-2233280,
           2233435-2233522,2233805-2233886,2233961-2234091,
           2234264-2234350,2234804-2234887,2234985-2235144,
           2235251-2235414,2235757-2235762,2235823-2235879,
           2236159-2236278,2236387-2236496,2236587-2236689,
           2236789-2236842,2237106-2237168,2237258-2237325,
           2237412-2237469,2237684-2237750,2238233-2238309,
           2238433-2238516,2238652-2238828,2239010-2239144
          Length = 1010

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = +3

Query: 381 PGQPEWANYIKGVIANFPIKV-----NGFDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGL 545
           P Q +WA Y+ G I     ++     +   I+V S VP G GVSSSA++EVA  + +   
Sbjct: 599 PSQ-KWAAYVAGTILVLMTELGVVFTDSMSILVSSSVPEGKGVSSSASVEVASMSAIAAA 657

Query: 546 TGRMVSLVEKAKLCQKAEHDFPGMPCGIMDQYIVTMGKKDHALLIDCKSLEAKQV 710
            G  +   + A LCQK E+   G PCG+MDQ     G+ +  L + C+  E K++
Sbjct: 658 YGLNIPPRDLAILCQKVENRIVGAPCGVMDQMTSACGEANKLLAMICQPAEVKEL 712


>04_04_1091 -
           30798420-30798584,30798870-30799045,30799127-30799216,
           30799673-30799742,30800598-30800697,30800922-30801001,
           30801347-30801412,30801489-30801597,30801862-30801905,
           30802171-30802242,30803198-30803311,30804342-30804398
          Length = 380

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
 Frame = +3

Query: 183 AAPGRVNLIGEHVDYCEGFVLPVAIPFLTVVVGSYNNTDVCRVITVLASGEELEASFPAT 362
           A P R+  +G H+D+  G V  + I +  V++G   + D       L SG+  E      
Sbjct: 42  ACPYRICPLGAHIDHQGGTVTAMTINY-GVLLGFVASDDA---EISLQSGQ-FEGVIRFR 96

Query: 363 IKAELRPGQ-PE---WANYIKGVI---ANFPIKVNGFDIVVVSDVPM--GSGVSSSAAIE 515
           +    +P + PE   W +Y +G +    NF   +    I  +S V     SG+SSSAA+ 
Sbjct: 97  VDDLQKPIENPENINWESYARGAVYALQNFGYDLKKGIIGYISGVKGLDSSGLSSSAAVG 156

Query: 516 VAVFTLLEGLTGRMVSLVEKAKLCQKAEHDFPGMPCGIMDQYIVTMGKKDHALLIDCKSL 695
           +A    LE +   +VS V+  +L +  E+ + G+  GI+D   + + +  +   +DCK +
Sbjct: 157 IAYLMALENVNDLVVSPVDNIQLDKSIENKYLGLENGILDPSAILLSRYGYLTFMDCKCI 216


>12_01_0810 +
           7429834-7429960,7430534-7430696,7430796-7430844,
           7431203-7431385,7431824-7431898,7431963-7432148,
           7432362-7432450,7432892-7433444
          Length = 474

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
 Frame = +3

Query: 156 YGRRPEVAAAAPGRV-NLIGEH--VDYCEGFVLPVAIPFLTVVVGSYNNTDVCRVITVLA 326
           Y   PE+   AP R  ++ G    ++Y +   +P+ +   ++     N   +     +L 
Sbjct: 207 YALNPELKVVAPWREWDITGREDAIEYAKKHNVPIPVTKKSIYSRDRNLWHLSHEGDILE 266

Query: 327 --SGEELEASFPATIKAELRPGQPEWANYIKGVIANFPIKVNGFDI 458
             + E  E  +  ++  E  P +PE+     G+IA  P+ +NG D+
Sbjct: 267 DPANEPKEDMYMMSVAPENAPSKPEYLEI--GIIAGVPVSINGKDL 310


>05_05_0080 -
           22243175-22243226,22243342-22243389,22243485-22243540,
           22243752-22243819,22244712-22244773,22245166-22245214,
           22245818-22245899,22245987-22246064,22246441-22246499,
           22246727-22246805,22246946-22247218
          Length = 301

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 27/99 (27%), Positives = 42/99 (42%)
 Frame = +3

Query: 321 LASGEELEASFPATIKAELRPGQPEWANYIKGVIANFPIKVNGFDIVVVSDVPMGSGVSS 500
           LA  E   +  PAT    L   + E        + N P K+     V+V D  + +G + 
Sbjct: 172 LAMAENASSVLPATKTYHLGLRRDEETLQPSIYLNNLPDKIPEGTRVLVVDPMLATGGTI 231

Query: 501 SAAIEVAVFTLLEGLTGRMVSLVEKAKLCQKAEHDFPGM 617
            AAI++ V   +     ++VS V      QK  + FPG+
Sbjct: 232 VAAIDLLVERGVTSKQIKVVSAVAAPPALQKLSNKFPGL 270


>12_02_1015 +
           25331667-25332169,25333305-25333406,25333775-25333919,
           25334002-25334186,25334297-25334401,25334507-25334604,
           25334686-25334924,25335030-25335123,25335190-25335275,
           25335579-25335677,25335804-25335869
          Length = 573

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = -2

Query: 724 SILIGTCFASKDLQSISNAWSFLPIVTMY*SMMPHGIPGKSCSAF*HSLAFSTKLTILPV 545
           S+++G+      + SI  +++ L ++ +  S +     G  C AF H+L     L + P 
Sbjct: 318 SLILGSKITDAAVASIVRSYASLDLLDLSGSSITDNGLGMICKAFPHTLT-RLLLALCPN 376

Query: 544 SPSSSVNTATSMAALLE 494
             S  V  ATS   LL+
Sbjct: 377 ITSCGVQVATSQLPLLQ 393


>10_05_0069 +
           8782535-8782920,8783016-8783281,8783588-8783869,
           8784559-8784632,8787230-8787461,8788067-8788077
          Length = 416

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +3

Query: 456 IVVVSDVPMGSGVSSSAAIEVAVFTLL 536
           + V SD+PMGSG+ SSAA  V++  +L
Sbjct: 135 VTVSSDLPMGSGLGSSAAFCVSMSGVL 161


>06_03_1303 +
           29180837-29181205,29181289-29181306,29181337-29181622,
           29185008-29186284,29186499-29187005
          Length = 818

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 544 SPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFI 434
           SPS S + + S +A   TP   GTS TTT S  ++ +
Sbjct: 530 SPSPSPSPSPSPSASATTPTQTGTSTTTTTSSMYSIL 566


>10_08_0117 +
           14942478-14942628,14943247-14943315,14943701-14943801,
           14944395-14944619
          Length = 181

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 283 RTTTQMSVA*SQCWRPVRSWRPVSL-LPSRQSYDQANRNGLII 408
           R++T   VA ++ W  +R+W  +   LP  Q  D A + GL +
Sbjct: 39  RSSTAYEVAGTEVWDMLRNWLNIGFQLPRDQDLDLAEKKGLTV 81


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = +3

Query: 444 NGFDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGLTGRMVSLVEKAKLCQKA 596
           +G ++V+V  +     VSSSA+ EV V  L+EG   R+V  VE+ +  ++A
Sbjct: 60  SGLELVIVPVMEGDQVVSSSASAEVLVSPLVEGEV-RVVPAVERRRWRRQA 109


>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
            282768-282923,283224-283349,283426-283560,283815-283942,
            284037-284148,284233-284547,284655-284771,284871-285166,
            285252-285783,287980-288082,288808-288881,288965-289062,
            289340-289380,289977-290032,290170-290244,290377-290469,
            290602-290850,290930-291002,291681-291766,291853-291938,
            292067-292142,292280-292347,292430-292496,292570-292665,
            292741-292843,293214-293309,293396-293466
          Length = 2047

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = +1

Query: 193  DASTSSENTLTIAKASFYQWQYRSLPSSWDRTTTQMSVA*SQCWRPVRSWRPVSLLPSRQ 372
            D  T+  N   ++  S      RS  +SW  T ++   A +    P +   P  L+P +Q
Sbjct: 1430 DNITTPNNGSGLSSGSNSSSFSRSRAASWSGTYSEQINAVAGARSPDQQTMPSPLMPGKQ 1489

Query: 373  SYDQANRNGLI 405
            S+ ++N N  +
Sbjct: 1490 SHSRSNSNSSV 1500


>06_01_0586 -
           4203024-4203425,4203527-4203595,4203681-4203746,
           4204006-4204071,4204642-4204719,4204811-4205233
          Length = 367

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -2

Query: 562 LTILPVSPSSSVNTATSMAALLETP 488
           L ++P+S +S++++ATS A+LL  P
Sbjct: 300 LCLMPISLASAISSATSSASLLSRP 324


>03_05_0845 -
           28155065-28155374,28156201-28156342,28156375-28156505,
           28156591-28156784,28156859-28156969,28157234-28157399,
           28157501-28157668,28157766-28158787
          Length = 747

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 292 LLYDPTTTVRNGIATGRTKPSQ*STCSPMRLTRPGAAAATSGRLPYATMN 143
           +LY   TTV  G+   RT+ S     S      P AAA   G+ P  T++
Sbjct: 275 MLYREATTVGGGVPYVRTQRSTRRVASGGTCWAPSAAATPEGKRPGQTIS 324


>02_05_1338 + 35790726-35791862
          Length = 378

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 435 IKVNGFDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGLTGRMV 560
           +K +   I +   +P+GSG+ SSAA   A    ++ L G ++
Sbjct: 137 VKSHAVSIHLTKGLPLGSGLGSSAASAAAAAKAVDALFGSLL 178


>01_07_0251 + 42289617-42291241,42291424-42292156
          Length = 785

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 212 SDEVDASRRRCSDFRSSAVCDYESVSGLSQQHPLAFRYRFAIHYFN 75
           S +VDA+ RR  +  S  V  + +V     QH  A   R A+H+F+
Sbjct: 468 SGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA---RDALHFFD 510


>11_01_0236 +
           1811822-1812971,1814930-1814979,1815676-1816116,
           1816199-1816309,1816934-1817074,1817153-1817323,
           1817421-1817625,1817714-1817886,1817997-1818079,
           1818487-1818626,1818806-1818891,1818957-1819142,
           1819172-1819365,1820387-1820736,1821153-1821235
          Length = 1187

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = -2

Query: 193 PGAAAATSGRLPYATMNLSVACRNNTPSPFGIASQFIILTQNIYISFVITIPLS 32
           P AAA ++G+   A+M++  +  +++P+P     + ++L+   Y+S  IT+  S
Sbjct: 12  PAAAAGSNGKGTAASMDVVSSSSSSSPAPAPSVLKSVLLSY-AYVSVWITLSFS 64


>06_01_0659 - 4798974-4799219
          Length = 81

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 709 TCFASKDLQSISNAWSFLPIVTMY*SMMPHGIPG 608
           T F+S +L + SN W  +     + S+M H +PG
Sbjct: 32  TAFSSAELLTDSNEWDLIVSFGAFISVMHHRLPG 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,168,703
Number of Sequences: 37544
Number of extensions: 543590
Number of successful extensions: 1576
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -