Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B21
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily a... 76 3e-14
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 37 0.017
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 30 2.0
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78018-4|CAB01448.1| 522|Caenorhabditis elegans Hypothetical pr... 29 3.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 4.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.6
Z70309-3|CAA94357.2| 358|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical ... 28 8.0
>AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily
assigned gene nameprotein 96 protein.
Length = 422
Score = 75.8 bits (178), Expect = 3e-14
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Frame = +3
Query: 129 QATDRFIVAYGRRPEVAAAAPGRVNLIGEHVDYCEGFVLPVAIPFLTVVVGSYNNTDVCR 308
Q ++F+ YG PEV PGRVNLIGEH+DY + V P+AI T ++ + N+T+
Sbjct: 6 QLAEQFVKLYGIEPEVRVTCPGRVNLIGEHIDYHDYGVFPMAIDAATTILAAKNDTNSIV 65
Query: 309 VITVLASGEELEASFPATIKAELRPGQPEWANYI----KGVIANFPIKVN-GFDIVVVSD 473
+ E + P K P+W +Y+ +G++ + G ++
Sbjct: 66 FSNFDSKYESWSSPIPCPWKG---CTSPKWFDYLLCGWRGIMNREDGQEQFGMSFLLYGT 122
Query: 474 VPMGSGVSSSAAIEVA-----VFTLLEGLTGRMVSLVEKAKLCQKAEHDFPGMPCGIMDQ 638
+P SG+SSS+++ A + +++ +S + A LC ++E G G MDQ
Sbjct: 123 IPPSSGLSSSSSLVCASALATLSLIVDNDPFEHISRKDFAHLCIESE-PLIGTLSGGMDQ 181
Query: 639 YIVTMGKKDHALLIDCKSLEAKQVPI 716
+ + AL ID L +K + +
Sbjct: 182 AAEVLASEGTALRIDFNPLRSKNIQL 207
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical protein
C06C3.1d protein.
Length = 968
Score = 36.7 bits (81), Expect = 0.017
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 15/199 (7%)
Frame = -2
Query: 553 LPVSPSSSVNTATSMAALLETPEPIG--TSDTTTISKPFTFIGKLAITPLI*LAHSGWPG 380
+P +P S+V AT + TP P G T+ T SKP + K ++
Sbjct: 619 VPSTPVSNVMAATISSTAKNTPSPAGSVTTINATFSKPSRWQSKTVTESEAERRNNSRMQ 678
Query: 379 RNSALMVAG----KLASNSSPDANTVITRQTSVLLYDPTTTV----RNGIATGRTKPSQ* 224
R G +L S + V R + VL P + + N ATG P
Sbjct: 679 RQHRRSTQGVTKEQLEEASKFATDEVARRNSQVLSTYPNSGLSISRSNRRATGPVNPEDL 738
Query: 223 STCSPMRLT-----RPGAAAATSGRLPYATMNLSVACRNNTPSPFGIASQFIILTQNIYI 59
+ +RL P + + +G LP T S ++ P+ G++S + T++ +
Sbjct: 739 APAMSLRLATAQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIV 798
Query: 58 SFVITIPLSTERTATASLT 2
+ + + P S TA S T
Sbjct: 799 AGLSSAP-SMRTTAPLSST 816
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 36.7 bits (81), Expect = 0.017
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 15/199 (7%)
Frame = -2
Query: 553 LPVSPSSSVNTATSMAALLETPEPIG--TSDTTTISKPFTFIGKLAITPLI*LAHSGWPG 380
+P +P S+V AT + TP P G T+ T SKP + K ++
Sbjct: 619 VPSTPVSNVMAATISSTAKNTPSPAGSVTTINATFSKPSRWQSKTVTESEAERRNNSRMQ 678
Query: 379 RNSALMVAG----KLASNSSPDANTVITRQTSVLLYDPTTTV----RNGIATGRTKPSQ* 224
R G +L S + V R + VL P + + N ATG P
Sbjct: 679 RQHRRSTQGVTKEQLEEASKFATDEVARRNSQVLSTYPNSGLSISRSNRRATGPVNPEDL 738
Query: 223 STCSPMRLT-----RPGAAAATSGRLPYATMNLSVACRNNTPSPFGIASQFIILTQNIYI 59
+ +RL P + + +G LP T S ++ P+ G++S + T++ +
Sbjct: 739 APAMSLRLATAQPYSPASVRSNAGTLPTMTSRFSEKAQSLPPASNGMSSTQPLSTRSAIV 798
Query: 58 SFVITIPLSTERTATASLT 2
+ + + P S TA S T
Sbjct: 799 AGLSSAP-SMRTTAPLSST 816
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.9 bits (64), Expect = 2.0
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = -2
Query: 571 STKLTILPVS---PSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*L 401
ST L++ +S PSSS ATS A T IGTS +S T + A T L
Sbjct: 459 STSLSMSSLSTYTPSSSTAGATSPATQQSTKPTIGTS----MSSGPTTVAPGASTESTVL 514
Query: 400 AHSGWPGRNSALMVAGKLA-SNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ* 224
S G L A + +SP A+TV T T + +TV T +T S
Sbjct: 515 QSSTPSGTTVTLPSGSSTATAGTSPQASTV-TTVTDI------STVSGSTVTSQTAESSL 567
Query: 223 STCSPMRLTRPGAAAAT 173
ST SP T G++ +T
Sbjct: 568 STESP---TSAGSSIST 581
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 598 SAF*HSLAFSTKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFT 440
S F FST++T PVS S+ V+T +S + T +P S TTT P T
Sbjct: 535 SPFATRFVFSTRVTFRPVS-STVVSTKSSTTS-STTTKPTTLSTTTTTQVPST 585
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -1
Query: 155 CDYESVS-GLSQQHPLAFRYRFAIHY--FNTKYLYFFCYHNP-VEYRAH 21
CDY ++S G L + ++I+Y ++ +LYF CY NP + Y H
Sbjct: 236 CDYYTISQGNDTCGDLVNQLSYSIYYTGYDPYFLYFACYLNPNLPYPPH 284
>Z78018-4|CAB01448.1| 522|Caenorhabditis elegans Hypothetical
protein W07G4.4 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 378 RPGQPEWANYIKGVIANFPIKVNGFD--IVVVSDVPMGSGVSSSA 506
R P A YI+G AN IKV D V++ D P+ + V+ +A
Sbjct: 197 RMAPPRVAEYIQGAFANGNIKVTVVDDQSVILKDFPLMAAVNRAA 241
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 4.6
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Frame = -2
Query: 571 STKLTILPVSPSSSVN--TATSMAALLETPE-PIGT----SDTTTISKPFTFIGKLAIT- 416
ST T PV+ +S T TS+ L TP P+ T S T + P T + A T
Sbjct: 549 STTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTT 608
Query: 415 ---PLI*LAHSGWPGRNSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATG 245
P++ + + P + L + +SP A +T T+ + ++T
Sbjct: 609 SKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 668
Query: 244 RTKPSQ*STCSPMRLTRPGAAAATS 170
T P+ T P+ T P +T+
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.6
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Frame = -2
Query: 571 STKLTILPVSPSSSVN--TATSMAALLETPE-PIGT----SDTTTISKPFTFIGKLAIT- 416
ST T PV+ +S T TS+ L TP P+ T S T + P T + A T
Sbjct: 605 STTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTT 664
Query: 415 ---PLI*LAHSGWPGRNSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATG 245
P++ + + P + L + +SP A +T T+ + ++T
Sbjct: 665 SKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 724
Query: 244 RTKPSQ*STCSPMRLTRPGAAAATS 170
T P+ T P+ T P +T+
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTT 749
>AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2a protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 622 HGIPGKSCSAF*HSLAFSTKLTILPVSPSSSVNTATSMAA 503
H + GKS F L+ +TI P++PS + A+S+ A
Sbjct: 277 HELQGKSLRVFVRDLSHVLVVTINPLTPSRPASVASSIGA 316
>Z70309-3|CAA94357.2| 358|Caenorhabditis elegans Hypothetical
protein R102.3 protein.
Length = 358
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 258 PFLTVVVGSYNNTDVCRVITVLASGEELEASFPA 359
PF+TV VG ++N D CR + + ++ + PA
Sbjct: 267 PFVTVNVGYHSNIDQCRRQKTIVIEQTVDGTVPA 300
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 211 PMRLTRPGAAAATSGRLP---YATMNLSVACRNNTPS 110
PM L PG AAATS + P + + SVA + +TPS
Sbjct: 103 PMALLLPGIAAATSPKFPSLRFLSQLSSVAEKVSTPS 139
>AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical
protein Y45F10D.2 protein.
Length = 179
Score = 27.9 bits (59), Expect = 8.0
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -2
Query: 376 NSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ*STCS-PMRL 200
NSAL + +S+P A++ + +S+ T NG +Q S+ S P+R
Sbjct: 66 NSALPGYLVSSRSSTPPASSASSSASSM------TPTGNGAQASTIPMNQGSSTSMPVRQ 119
Query: 199 TRPGAAAATSGRLPYATMNLSVACRNNTPSPFGIASQFIILTQNIY 62
R + T+ P +T + + + + +T P+G +F T ++
Sbjct: 120 KRQAVSTTTTTASPMSTSSPTPSQQPSTTQPYGTDEEFYARTDLVH 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,831
Number of Sequences: 27780
Number of extensions: 423866
Number of successful extensions: 1432
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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