Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B19
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9URX1 Cluster: Membrane transporter; n=1; Schizosaccha...    36   1.8  
UniRef50_A5K1X7 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  

>UniRef50_Q9URX1 Cluster: Membrane transporter; n=1;
           Schizosaccharomyces pombe|Rep: Membrane transporter -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 504

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -3

Query: 750 LIICIFLGIGKRFHTNGTLHTGSTFFFYLFADSIRGYSSYAQIYLWYYM-DCLYTLDLVQ 574
           ++IC+  G G  F    T  + +   F +   + RGY+ YA +Y++Y M D ++      
Sbjct: 350 VLICVIWGGGLAFQLKYTRKSVAESDFVVTDFTHRGYTGYAFLYIFYGMLDAIFQSYAYW 409

Query: 573 LLTDWSRN*ER*IVYYSIYKS 511
           ++   S +  +  VY   YKS
Sbjct: 410 IIGSLSNDTNKLAVYMGFYKS 430


>UniRef50_A5K1X7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 3996

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 573 VVLDLMYKDNPYSTIDISGRSSNNLLCYQRKGRKKK 680
           V L L+Y  N Y+  D+SGRSSN+    +RK  KK+
Sbjct: 555 VPLFLLYISNAYAVGDLSGRSSNSAHAIRRKRLKKR 590


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,489,385
Number of Sequences: 1657284
Number of extensions: 14240045
Number of successful extensions: 26174
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26169
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)