Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B17
(791 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45) 36 0.028
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.35
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 32 0.46
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30) 31 0.81
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.1
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.1
SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45) 31 1.4
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.4
SB_30126| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.9
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33) 29 3.3
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 3.3
SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15) 29 3.3
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.3
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.3
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37) 29 4.3
SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.3
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.7
SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10) 29 5.7
SB_58902| Best HMM Match : TNFR_c6 (HMM E-Value=0.032) 28 7.5
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.5
SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42) 28 7.5
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.5
SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.5
SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28) 28 7.5
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_24547| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-18) 28 10.0
SB_23162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45)
Length = 1032
Score = 36.3 bits (80), Expect = 0.028
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 388 SIQTDETEQSASEFIVPEILEVPVENEKLDVI-----PHTPDRWPTLEILPGGVIKPADK 552
S ++D E S S +P L+ + N K+++ P + P + ++PA +
Sbjct: 420 STESDSDEWSKSGTKLP--LQTCLTNSKMNIKDCETEPDEDEAEPDEDETISNPVEPAQE 477
Query: 553 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHV-RWHENEQKV 693
+ N S K +T++ + +AC C ++F + +H+ R H +E KV
Sbjct: 478 SSNPTSHKEGITISEKKCHACLFCGKSFTCK--MARHIKRSHGSETKV 523
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 571 RKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
R+ +T E +AC+ C++ F L+ H+R H NE+
Sbjct: 117 RRHMLTHTKEKPFACSTCNKAFATKQTLIVHIRVHTNER 155
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 598 EMIYACAKCSQTFKFLYCLVKHVRWH-ENEQKVKKSNIAD 714
E Y C KC + FK + L HV+ H +N +K K ++ +
Sbjct: 68 ERPYECDKCHKRFKHKWTLKDHVKLHNDNLEKPHKCDLCN 107
>SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 425
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 538 KPADKADNQNSRKSRV--TLNSEMIYACAKCSQTFKFLYCLVKHVRWH 675
K D++ +Q+S R T + + Y C C Q F +LY L KH+ H
Sbjct: 376 KYCDRSFSQSSTVLRHMRTHDKDKSYRCVHCGQVFAYLYALDKHLDTH 423
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 32.3 bits (70), Expect = 0.46
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 442 ILEVPVENEKLDVIPHTPDRWPTLEIL-PGGVIKPADKADNQNSRKSRVTLNSEMIYACA 618
ILE V ++ H D + L P V + D++N + +S + + A
Sbjct: 30 ILEASVIHQDFLRFIHVDDHEMITKYLQPNSVEQKIKILDDENDGSEKKEEDSCSVMSSA 89
Query: 619 KCSQTFKFLYCLVKHVRWH---ENEQKVKKSNIADLILSXNRKKQDKQ 753
KC TF+ L K+++W Q V K + D +++ NR D++
Sbjct: 90 KCQGTFRMLN---KNMKWQWLTGTAQVVFKGSEPDFVITTNRPLSDEE 134
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSXNRKKQDKQANLNTGTXK 780
Y C +CS TFK Y L H++ ++ K N+ S + + QA L+ G K
Sbjct: 171 YKCEQCSGTFKDNYNLRHHIQSVHLGERPYKCNLCGKCFSMSHTLKRHQATLHFGEEK 228
>SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30)
Length = 824
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 556 DNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
D + ++ + E Y C C FK LY L +H+R + ++ K K
Sbjct: 758 DKTHLQRHTMIHTGEKPYQCEVCGIPFKELYSLTRHMRCNRHKTKAK 804
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 553 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
A N + K T + E Y C +C + F L KH+R H E+ K
Sbjct: 444 AHNSDLTKHMRTHSGEKPYKCTQCGKAFVQNSNLTKHMRTHSGEKPYK 491
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 559 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
N N K T + E Y C +C + F L H+R H E+ K
Sbjct: 474 NSNLTKHMRTHSGEKPYKCTQCGKAFAHNDVLTTHMRTHSGEKPYK 519
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
T + E Y C +C + F + + L H+R H E+ K
Sbjct: 539 THSGEKPYKCTQCGKAFAWAFNLTTHMRTHSGEKPYK 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
T + E Y C +C + F + L H+R H E+ K
Sbjct: 511 THSGEKPYKCTQCGKAFARAFNLTTHMRTHSGEKPYK 547
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
T + E Y C +C + F L H+R H E+ K
Sbjct: 567 THSGEKPYKCTQCGKAFAHNGVLTTHMRTHSGEKPYK 603
>SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 921
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = +1
Query: 454 PVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEMIYACAKCSQT 633
P EN + + P +E + + PADKA+N + Y C C +
Sbjct: 290 PPENSTAEANTSPNEGTPKIESVFSLQLIPADKAEN-------------ITYVCKSCGEQ 336
Query: 634 FKFLYCLVKHVRWHENEQKVKKSNIAD 714
FK + L H+R H +V SN A+
Sbjct: 337 FKKKFLLDIHLRSHALSGEVATSNAAN 363
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
T + + Y C C +TF CL H+R H E+ K
Sbjct: 346 THSGDRPYKCEHCDKTFARTTCLTVHIRTHTGEKPHK 382
>SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45)
Length = 243
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
T N E Y C C++ F L KHVR H E+
Sbjct: 183 THNGERPYKCKVCNKAFADSSTLTKHVRTHTGEK 216
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 544 ADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHEN 681
A K +Q +R S+V + + C +C + F+ H+R+H N
Sbjct: 776 AFKIKDQLARHSKVHTREKQTFTCEECDKVFEMACGYRTHMRFHSN 821
>SB_30126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 508 SAIDLVCEVLHLVFRFQLELLVFREQ*TQKRSVLFHQFGLTLYRQRWSDHLLSRIRYR 335
S +D+ H+V RF LE + + +KR+ L LTL R+S L R+R+R
Sbjct: 16 SHLDVSARETHVVLRFSLE---HKRKRKRKRTQLLDFLALTLVFDRFSLELRFRLRFR 70
>SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 268 DVQPSREGRIEIFETCIIDHIEYDNECVIGDDQTNVG 378
D+ EG+ + +TC H EY+ CV G QT G
Sbjct: 140 DIDECAEGKDDCSQTCANTHGEYECACVDGYKQTAAG 176
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 547 DKADNQNSRKSRVTLN--SEMIYACAKCSQTFKFLYCLVKHVRWHEN 681
+K +++ S LN S+ + C CS+ FK L KH+R H++
Sbjct: 878 EKTFKRSTHLSEHMLNHSSDQPFGCTHCSEKFKVSSMLTKHMRSHKD 924
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 583 VTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
+T E + C+ CS+++ LV+H R H +E+
Sbjct: 753 LTHRGERPFQCSTCSKSYSTSRSLVRHERSHSSEK 787
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 565 NSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENE 684
N + ++ + E YAC KC +TF+ LV H R H +E
Sbjct: 287 NLKAHALSHSHERPYACDKCDKTFQRTSQLVIHNRIHNSE 326
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 547 DKADNQNSRKSRVTL-----NSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
DK D R S++ + NSE Y+C KC ++F+ L H+ H E+
Sbjct: 304 DKCDKTFQRTSQLVIHNRIHNSETPYSCDKCEKSFRGRTNLRLHLLVHSLEK 355
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 574 KSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH--ENEQKVKKSNIADLILSXNRKKQD 747
K V +E Y C CS +F CL KH H +E+ D S ++ D
Sbjct: 405 KPLVVYFTEKPYQCESCSMSFPRSSCLNKHRLTHMDTSERNAYVCQTCDKTFS-SKSNLD 463
Query: 748 KQANLNTG 771
+ L+TG
Sbjct: 464 QHLKLHTG 471
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 550 KADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKK 699
+A+ + VT S+ IY C +CS+TF + L +H + N +K K
Sbjct: 69 QANAEQQMADDVTACSKKIYQCDQCSKTFTRPHDLRRHTKSIHNGEKPYK 118
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 562 QNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 675
+ R S T S +Y C +CS++F L H+ WH
Sbjct: 138 EEERASPSTTESA-VYQCTQCSKSFSNSSSLATHIGWH 174
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 538 KPADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKV 693
K + + + S T+ S + + C CS++F L KH WH K+
Sbjct: 268 KSVNPQEEDDVTASLTTMES-LAHQCTFCSRSFHDYSSLAKHTTWHRKRLKL 318
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 556 DNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADL 717
+ N++ S++ + + C CS FK L KH WH K K A L
Sbjct: 402 EKPNAKPSKMEFSD---HKCTHCSLAFKDSSSLAKHNAWHAKTFKQKDKRGAPL 452
>SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33)
Length = 644
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 538 KPADKADNQNSR-KSRVTLNS-EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKS 702
K +KA Q+ + K + L++ E Y C++C + FK L +H R H E+ K S
Sbjct: 385 KVCNKAFKQSCQLKQHMRLHTGEKPYKCSECDRGFKQASQLNQHYRLHTGEKPYKLS 441
>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 559 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRW 672
N + RK++ ++ Y C +C + F + Y KH+++
Sbjct: 288 NPSVRKTKFVISDGESYTCDRCGKVFAYKYYRDKHLKY 325
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 547 DKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
D + +N+ R N I C +C++ FK+ L KH++ H N +K K
Sbjct: 758 DGSHARNAAAKRKLSNGPRI--CEECNKAFKYPSDLKKHLQIHTNIKKFK 805
>SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 196
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 613 CAKCSQTFKFLYCLVKHVRWHENEQKVKK-SNIADLILSXNRKKQDKQANLN 765
CA+CS+ FK L H+R +++ +++ I N K ++KQ N+N
Sbjct: 77 CARCSRRFKSADTLGNHLRGYDSHFIMQEIGAIVKKHTYVNSKGEEKQININ 128
>SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15)
Length = 230
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 598 EMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
E Y C CS+ F L KHVR H E+
Sbjct: 193 EKPYKCTYCSKAFSLTSNLYKHVRSHTREK 222
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSXNRKKQDKQANLNTG 771
Y C KC++ F + LVKH R + K + +I S +R K +TG
Sbjct: 591 YVCTKCNKAFAYSASLVKHDRVYHRGVKPYECDICGRAFS-DRSGLVKHERTHTG 644
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +1
Query: 463 NEKLDVIPHTPDRWPT----LEILPGGVIKPADKADNQNSRKSRVTLNSEMIYACAKCSQ 630
+E+ D PD WPT + G ++ + +Q K R + + C CS+
Sbjct: 771 SEEGDSEDEDPDDWPTEKENMYTEDGTLVVHIPYSHSQRKMKGR---RGNVRFTCRYCSK 827
Query: 631 TFKFLYCLVKHVRWHENEQKVK 696
F++ L H R H E+ K
Sbjct: 828 GFQWHSHLASHERTHTGEKPFK 849
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
Y C C ++F LV+H+R H E+ K
Sbjct: 932 YKCQYCVRSFNDSQMLVRHIRSHTGEKPFK 961
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Frame = +1
Query: 424 EFIVPEILE-VPVEN--EKLDVIPHTP-------DRWPTLEILPGGVIKPADKADNQNSR 573
+F+ PE+++ + V+N E + ++PHT W T P ++ +
Sbjct: 70 KFLAPEVMQPIRVKNPPEPMVIVPHTKLEKERITHSWNTKAASRSAT--PEFESPKEEKA 127
Query: 574 KSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
+ N++ Y C CS+ F + +HV H ++ K
Sbjct: 128 QELDVNNTDKPYTCQHCSKVFTRSWNFQRHVLIHTGQKPYK 168
>SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37)
Length = 288
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 553 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKH 663
AD N R T + Y+C +CS++F + L+KH
Sbjct: 234 ADRSNLRAHLQTHSDVKKYSCKQCSKSFSRMSLLLKH 270
>SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 268
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQ 687
+ C+ C + FK CL KH R H E+
Sbjct: 78 HKCSICEKGFKTKRCLTKHFRTHTGER 104
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +1
Query: 538 KPADKADNQNSR-KSRVTLNS-EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIA 711
K DKA +Q+ K + +++ E Y C C + F Y L H+R H E+ K +
Sbjct: 821 KECDKAFSQSGGLKVHMRVHTGEKPYPCPLCERAFAKGYNLKTHMRTHTGEKPYKCDFCS 880
Query: 712 DLILSXNRKKQDKQANLNTGTXKVV 786
L + Q Q + G + V
Sbjct: 881 KLFSQHSTLMQHVQRHQGKGPKQKV 905
>SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10)
Length = 269
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 592 NSEMIYACAKCSQTFKFLYCLVKHVRWHENE 684
+++M Y C CSQ F+ L KH+ +H ++
Sbjct: 193 DNKMSYKCEVCSQLFRSPLGLQKHLEFHTDD 223
>SB_58902| Best HMM Match : TNFR_c6 (HMM E-Value=0.032)
Length = 397
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 749 LSCFFLFXDKIRSAILDFLTFCSFSCHLTC 660
L F F ++ LD L CSFSCH C
Sbjct: 319 LDVFEQFAVSQATSSLDTLAPCSFSCHFAC 348
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 451 VPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKA-DNQNSRKSRVTLNSEMIYACAKCS 627
VP+++ V+ H +R G I+P + + + +T + + I+ C KC
Sbjct: 288 VPLDSSGQPVVVHLKER--------GRPIRPKETGLTEEELTQEIITSSGQKIFKCKKCE 339
Query: 628 QTFKFLYCLVKHVRWH 675
+ F F L +H+ H
Sbjct: 340 KEFSFSSRLKRHLLVH 355
>SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)
Length = 554
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 553 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKH 663
AD N R T Y+C++C ++F + LVKH
Sbjct: 509 ADRSNLRAHMQTHAVVKKYSCSRCKKSFSRMSLLVKH 545
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 553 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
A + K T E Y+C C + F L+ H R H NE+ K
Sbjct: 247 ASKSDLDKHERTHTGEKPYSCKYCGRMFGESSSLIMHQRIHTNEKPYK 294
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 583 VTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
+T + E + C KC ++F + L H+R H E+
Sbjct: 79 LTHSGEKPHQCPKCDKSFTLAWNLKNHLRLHTGEK 113
>SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 761 RLACLSCFFLFXDKIRSAILDFLTFCSFSCHLTCLTK 651
RL C+ C F A+L+ L C +CH C K
Sbjct: 31 RLICVICQEFFCVFPGGAVLEILPCCKQACHYPCFWK 67
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 559 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
N R SR+ Y C CS++F + LV H+R H E+
Sbjct: 444 NDLKRHSRIHTGIRP-YKCHVCSKSFTVEFTLVCHLRTHTGER 485
>SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28)
Length = 998
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 241 DNVRLVRMEDVQPSREGRIEIFETCIIDHIEYDNE---CVIGDDQTNVGGIVSIQTDETE 411
+++ L +E+ + R ++E + H++ +E C + G I ++Q + TE
Sbjct: 845 EDLSLASVEEFEHQRAKKLEQENKVLSKHLQEVSEQLTCARSTISSLEGTIHTMQMNTTE 904
Query: 412 QSASEFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNS 570
++ I + EN+KL TP P+ ++ P +P+D D NS
Sbjct: 905 ------LLGLIRSLTKENDKLKQ-ERTPMATPSAQLTPLSPREPSDHTDTDNS 950
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 538 KPADKADNQNSRKSRVTLNS--EMIYACAKCSQTFKFLYCLVKHVRWHENEQK 690
KP + +++NS K+ + +S E + C C + + + +H+ + EQK
Sbjct: 42 KPFEYDESENSLKTDIETSSVKEKTFGCGLCIEKLRVASSMKEHIETIQKEQK 94
>SB_24547| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-18)
Length = 195
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 592 NSEMIYACAKCSQTFKFLYCLVKHVRWH 675
+ E + CA C + F+ LV+HVR H
Sbjct: 110 SGEKPFKCAHCERLFRQASTLVRHVRTH 137
>SB_23162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 508 SAIDLVCEVLHLVFRFQLELLVFREQ*TQKRSVLFHQFGLTL 383
S +D+ H+VFRF LE R Q ++LF +F L L
Sbjct: 3 SHLDVSASETHVVFRFSLEHKRKRTQLLDFLALLFDRFSLVL 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,611,862
Number of Sequences: 59808
Number of extensions: 417751
Number of successful extensions: 1382
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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