Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B17
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 31 1.2
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 1.2
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.2
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.2
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 30 1.7
U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated p... 30 2.2
AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein. 30 2.2
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 29 2.9
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 29 2.9
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 29 2.9
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 29 2.9
AF026205-7|AAD47130.1| 118|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81585-1|CAB04681.2| 343|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 3.8
U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate fi... 29 3.8
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 29 3.8
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 29 3.8
U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 29 5.0
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 29 5.0
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 5.0
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 29 5.0
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 29 5.0
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 28 6.7
M94130-1|AAA91281.1| 288|Caenorhabditis elegans transformer pro... 28 6.7
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 28 6.7
AL117202-6|CAC42377.1| 287|Caenorhabditis elegans Hypothetical ... 28 6.7
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 28 6.7
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 28 6.7
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 28 6.7
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 388 SIQTDETEQSASEFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQN 567
++Q DE + +E + I + E+ V T D + + + + N+
Sbjct: 279 ALQNDEWNDANTETTLSTITGTSSQFERDSVSEVTNDLSENINDIDEEIEFGTTEPPNKI 338
Query: 568 SRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVR-WH-ENEQKVKKS 702
+ SR ++ + ++C C +TF L KHVR +H EN QKV KS
Sbjct: 339 RKHSRSRVHGD--FSCEICLKTFTLRDNLRKHVRVYHSENSQKVVKS 383
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 598 EMIYACAKCSQTFKFLYCLVKHVR-WHENEQKVKK 699
E IY C C+ F+ LV H WHEN++K+++
Sbjct: 86 EYIYKCIYCTGAFRVEEDLVYHREDWHENKEKLRR 120
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 592 NSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
N + YAC C++TF L L HVR H E+ K
Sbjct: 503 NGKTRYACKDCNKTFGQLSNLKVHVRTHTGERPFK 537
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +1
Query: 592 NSEMIYACAKCSQTFKFLYCLVKHVRWHE 678
+S+++Y+C C + FK+ L+KH++ H+
Sbjct: 435 HSDVMYSCKHCPEKFKWKKQLMKHMKEHD 463
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQ 687
+ C +C++ FKF + L +H+R H E+
Sbjct: 24 FKCPECTKAFKFKHHLKEHIRIHSGEK 50
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQ 687
+ C +C++ FKF + L +H+R H E+
Sbjct: 24 FKCPECTKAFKFKHHLKEHIRIHSGEK 50
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQ 687
+ C +C++ FKF + L +H+R H E+
Sbjct: 24 FKCPECTKAFKFKHHLKEHIRIHSGEK 50
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKH-VRWHENEQKVKKSNIA 711
T E+ Y C KC + F+ CL KH + H +E V+ ++A
Sbjct: 349 THTKELPYGCGKCDKRFRDNSCLRKHELAAHTDEPIVRPISVA 391
>U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated
protein 98 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 526 GGVIKPADKAD-NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
GG + +D+ + Q+ + N + Y C C TF F+ L H R H+ Q
Sbjct: 85 GGALDGSDQQEVRQDGTSVQKDDNGFVFYKCRFCGLTFNFMNTLRAHERIHDVSQ 139
>AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 526 GGVIKPADKAD-NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
GG + +D+ + Q+ + N + Y C C TF F+ L H R H+ Q
Sbjct: 85 GGALDGSDQQEVRQDGTSVQKDDNGFVFYKCRFCGLTFNFMNTLRAHERIHDVSQ 139
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 559 NQNSRKSRVTLNSE-MIYACA--KCSQTFKFLYCLVKHVRWHENEQKVKKS 702
N + RK + ++S Y+C C +T+ L KH + HENE+K + S
Sbjct: 180 NSSDRKKHMHVHSSHKPYSCMYPDCGKTYTHPSSLRKHTKVHENEKKSQLS 230
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 559 NQNSRKSRVTLNSE-MIYACA--KCSQTFKFLYCLVKHVRWHENEQKVKKS 702
N + RK + ++S Y+C C +T+ L KH + HENE+K + S
Sbjct: 193 NSSDRKKHMHVHSSHKPYSCMYPDCGKTYTHPSSLRKHTKVHENEKKSQLS 243
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 592 NSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ--KVKKSNIADLI 720
+ E Y C+ C + F L HVR H E+ KV+K I D +
Sbjct: 547 SGERPYKCSFCPKAFTASSILRTHVRQHSGEKPFKVRKRTIYDYV 591
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 559 NQNSRKSRVTLNSE-MIYACA--KCSQTFKFLYCLVKHVRWHENEQKVKKS 702
N + RK + ++S Y+C C +T+ L KH + HENE+K + S
Sbjct: 181 NSSDRKKHMHVHSSHKPYSCMYPDCGKTYTHPSSLRKHTKVHENEKKSQLS 231
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/57 (21%), Positives = 32/57 (56%)
Frame = +1
Query: 547 DKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADL 717
+K++NQ + + +++ C KCSQT + + + K ++ +N++ + +++L
Sbjct: 415 EKSENQEAWDLDESSSTKSPIDCKKCSQTLQTIEDVKKELKTSQNKENKMRKKVSEL 471
>AF026205-7|AAD47130.1| 118|Caenorhabditis elegans Hypothetical
protein T23E7.2d protein.
Length = 118
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 40 TKSVIKFVFKAKSTIPCHICCFFYLYNIYTLNVL 141
T +IK F + IP FYLYN+YTL+++
Sbjct: 8 TLILIKNTFYVQYCIPYFFYYPFYLYNVYTLSLI 41
>Z81585-1|CAB04681.2| 343|Caenorhabditis elegans Hypothetical
protein T05E12.1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 190 CFNSKGMFT-GKYFGFPVEHSTCRCY 116
C S GMFT KY GFP+ +T C+
Sbjct: 71 CIVSSGMFTHDKYIGFPLIATTSGCF 96
>Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical
protein C56A3.4 protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 6 FICQLSLTSI*N*ECNKICFQGKINNSLPYLLFLL-PI*HLHVE 134
F+C+L+ + CN +CF N++ + LL PI H+HV+
Sbjct: 171 FLCKLTEKRVLLRPCNHLCFCEPCNDTFQKQIPLLCPICHMHVQ 214
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
R09A8.1 protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Frame = +1
Query: 424 EFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIK----PADKADNQNSRKSRVTL 591
+F V + L N K + P + + W T G++K P D++ NQN+R+ ++
Sbjct: 948 QFSVIDRLLPSDSNTKPLLAPASNNSWITANSRATGILKGRSGPVDQSQNQNTRRENASM 1007
Query: 592 NS-EMIYACAKCSQTFKFLYCLV--KHVRWHENEQKVKKSNIADLILSXNRKKQDKQA 756
+ + + K F C++ + +R + + ++++S I+ +RK +Q+
Sbjct: 1008 SGRQPLDTSRKHMFLFCNKVCVITDEEIRRDKEQHRLERSQISAERKLEHRKAMRRQS 1065
>U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate
filament, c protein2, isoform c protein.
Length = 685
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 445 LEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEM 603
++ PV+ +DV+ + DRW T +I GG +D Q SRV +N +
Sbjct: 330 VDAPVDTSPIDVVKNVIDRWET-KI--GGTTTRFYASDQQLRSVSRVDMNDNV 379
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 445 LEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEM 603
++ PV+ +DV+ + DRW T +I GG +D Q SRV +N +
Sbjct: 330 VDAPVDTSPIDVVKNVIDRWET-KI--GGTTTRFYASDQQLRSVSRVDMNDNV 379
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 445 LEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEM 603
++ PV+ +DV+ + DRW T +I GG +D Q SRV +N +
Sbjct: 330 VDAPVDTSPIDVVKNVIDRWET-KI--GGTTTRFYASDQQLRSVSRVDMNDNV 379
>U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical
protein F56D1.2 protein.
Length = 718
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 382 IVSIQTDETEQSAS---EFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADK 552
IV IQT+E +AS + P+ L + + +D+ PH + L +LP P
Sbjct: 629 IVPIQTEEDRIAASIKYNLVPPQALVDSDDEDDVDLQPHASHQNQPLILLPPEQCGPDSD 688
Query: 553 ADNQNSRKSRVTLNSE 600
+D+++ S S+
Sbjct: 689 SDSESDSSSESESESD 704
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 328 IEYDNECVIGDDQTNVGGIVSIQTDETEQSASEFIVPEILEVPVENEKLDVIPHTPDR 501
I D +I ++ T G IV + D E A +FI I+ VP+E KL+ +P R
Sbjct: 279 IPLDTLSLICNEITVKGSIVGSRMDVDE--AIDFITRGIVHVPIELVKLEDVPSVYQR 334
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 589 LNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK-KSNIADLILSXNRKKQDKQANLN 765
+ + IY C KC L CL +H R H + K+ SN + + + ++ +L
Sbjct: 788 VGKDKIYCCDKCPYVTLALGCLWRHHRNHRDTAKINICSNCSYSSIDQRKMEEHTIIHLG 847
Query: 766 TGTXKVV 786
G + V
Sbjct: 848 LGLNEAV 854
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 589 LNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK-KSNIADLILSXNRKKQDKQANLN 765
+ + IY C KC L CL +H R H + K+ SN + + + ++ +L
Sbjct: 788 VGKDKIYCCDKCPYVTLALGCLWRHHRNHRDTAKINICSNCSYSSIDQRKMEEHTIIHLG 847
Query: 766 TGTXKVV 786
G + V
Sbjct: 848 LGLNEAV 854
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 265 EDVQPSREGRIEIFETC-IIDHIEYDNECVIGDDQT-NVGGIVSIQTDETEQSASE 426
EDV+P +EG+I I T H+ +G ++T +V + ++ +E EQ SE
Sbjct: 520 EDVKPLKEGQIYIDSTTEYCRHVGEITTLGLGGNRTVDVSEVKKVKEEEMEQEGSE 575
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 ILP-GGVIKPADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKV 693
++P G +++ ++ DN + + R+T + ++Y C+Q ++CL H +
Sbjct: 2198 VIPRGALVEFIEEMDNDDGKWIRLTDETALLYG---CNQGVGQVWCLAYHRPLQRELIPL 2254
Query: 694 KKSNIADLILSXNRKKQDKQAN 759
K + + RK+ +K++N
Sbjct: 2255 KADTDREKAVKLRRKEIEKESN 2276
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 580 RVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 675
R T E Y CA+C + F L KH+R H
Sbjct: 213 RRTHTGERPYPCAQCEKAFTDSSTLTKHLRTH 244
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 580 RVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 675
R T E Y CA+C + F L KH+R H
Sbjct: 154 RRTHTGERPYPCAQCEKAFTDSSTLTKHLRTH 185
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +1
Query: 355 GDDQTNVGGIVSIQTDETEQSASEFIVPEILEVPVENEKLDVIPHTPDRWPT-LEILPGG 531
G+ Q + G D + +S++ IVP P K+ VIP P + P G
Sbjct: 463 GEPQIRLEGSTGNSKDLSVESSAAVIVPRTTVAPGVTNKVSVIPFRPLHFTAPPRNGPPG 522
Query: 532 VIKPADKADNQ 564
V P A N+
Sbjct: 523 VAPPKGAAGNE 533
>M94130-1|AAA91281.1| 288|Caenorhabditis elegans transformer
protein protein.
Length = 288
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 625 SQTFKFLYCLVKHVRWHENEQKVK 696
++TFK LY L+ HVR H E+ K
Sbjct: 254 NETFKALYMLIVHVRRHTGEKPNK 277
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 625 SQTFKFLYCLVKHVRWHENEQKVK 696
++TFK LY L+ HVR H E+ K
Sbjct: 254 NETFKALYMLIVHVRRHTGEKPNK 277
>AL117202-6|CAC42377.1| 287|Caenorhabditis elegans Hypothetical
protein Y47D3A.6b protein.
Length = 287
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 625 SQTFKFLYCLVKHVRWHENEQKVK 696
++TFK LY L+ HVR H E+ K
Sbjct: 253 NETFKALYMLIVHVRRHTGEKPNK 276
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 625 SQTFKFLYCLVKHVRWHENEQKVK 696
++TFK LY L+ HVR H E+ K
Sbjct: 253 NETFKALYMLIVHVRRHTGEKPNK 276
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 559 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
N N + R+T ++C+ CS+ F Y L H+ HE +
Sbjct: 148 NGNYKNHRLTHEDTKKFSCSICSRAFHQSYNLAFHMFTHEEHK 190
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 589 LNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLIL 723
L +++ C C Q +K H+R HE E+K + ++ L +
Sbjct: 153 LPKPILFQCPICHQKYKRAPYFAAHIRQHEAEEKRQHRDVKRLAI 197
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 328 IEYDNECVIGDDQTNVGGIVSIQTDETEQSASEFIVPEILEVPVENEKLDVIP 486
+ +D I + T G IV + D E A EF+ I++VP+E KL+ +P
Sbjct: 278 VTFDTTPFIFNAITIKGSIVGSRLDVDE--AMEFVTRGIVKVPLELVKLEDVP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,212,088
Number of Sequences: 27780
Number of extensions: 324059
Number of successful extensions: 1063
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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