Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B17
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.81 
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               25   1.1  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    24   1.9  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   7.5  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 598 EMIYACAKCSQTFKFLYCLVKHVRWHENEQKV 693
           E +Y C  C +TF     +  H++ H +   V
Sbjct: 257 EKVYKCTLCHETFGSKKTMELHIKTHSDSSVV 288



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
           T   E  Y C  CS++F     L  H R H  E+  K
Sbjct: 113 THTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYK 149



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 607 YACAKCSQTFKFLYCLVKHVRWHENEQ 687
           Y C  C +TF     L +H R H  E+
Sbjct: 92  YRCNICGKTFAVPARLTRHYRTHTGEK 118



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 598 EMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
           E  + C  CS+TF     LV H+R H  E+
Sbjct: 173 ERPHKCTVCSKTFIQSGQLVIHMRTHTGEK 202



 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 598 EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 696
           E  Y C  C + F+    L +H+R H  E+  K
Sbjct: 145 ERPYKCDVCERAFEHSGKLHRHMRIHTGERPHK 177



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +1

Query: 586 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
           T   E  Y C  C + F     L  H R H  E+
Sbjct: 197 THTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEK 230


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 619 KCSQTFKFLYCLVKHVRWHENEQKVKKSN 705
           KC    KF  C++ +V++H  +  +  +N
Sbjct: 110 KCLTAQKFSRCVIDYVKFHITQYMISNAN 138


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 574 KSRVTLNS-EMIYACAKCSQTFKFLYCLVKHVRWHENEQ 687
           K+ + L++ E  Y C+ C + F  +  L +H+R H  E+
Sbjct: 26  KTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGER 64


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 559 NQNSRKSRVTLNSEMI-YACAKCSQTFKFLYCLVKHVR 669
           N++   S +  +S +  Y CA C+   K+ + L  H+R
Sbjct: 28  NKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLR 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 481  IPHTPDRWPTLEILPGGVIKPADKADNQN 567
            +P  P+R PT+++ P     P+D+  N +
Sbjct: 1365 VPERPERVPTVDLSP----SPSDRGRNDD 1389


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 388 TLYRQRWSDHLLSR 347
           TLY+Q WS ++  R
Sbjct: 287 TLYKQMWSQNITER 300


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 607 YACAKCSQTFKFLYCLVKHVRWH 675
           ++C  C + +  L  L  H+R H
Sbjct: 17  FSCKYCEKVYVSLGALKMHIRTH 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,936
Number of Sequences: 438
Number of extensions: 3720
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)