Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B14
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.32 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 3   LFHIMPLS*LCFYYLII*LMYLHKNYCLD*YKLYCNYHFYTTYKQF 140
           +F +  L  LC YY ++ L +L    C+  Y  YC +  +T +  F
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFL---LCI--YYFYCAFIIFTVHLLF 162


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 149 TLTKLFICCIKMVITV*FILIE 84
           TL  LF C + +V+T  ++LIE
Sbjct: 271 TLLILFSCLLHLVVTPYYLLIE 292


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 61  CTYTKTIASININYTVITIFIQHINNLV 144
           CT +K    +NI++T+   FI   N +V
Sbjct: 625 CTVSKGDYPLNISWTLNGHFIDQTNGIV 652


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 676 IHNICMYVYNAFTSRGIVFI 617
           I N C ++YN F S  ++ I
Sbjct: 138 IENYCQFLYNCFHSTLLLMI 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,332
Number of Sequences: 336
Number of extensions: 3592
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)