Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B13
         (821 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    24   4.9  
Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    24   6.5  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   8.6  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   8.6  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   8.6  

>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 221 RYRRTQEICVRRLL*QFHNSLLTTSLRYTECFRSFGLQSS 340
           R+R T   C RRL  +  +  +       ECF   GL  S
Sbjct: 226 RFRETTGTCYRRLKSECQDECVLAGRFLRECFYEGGLLGS 265


>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +3

Query: 240 RFACGGYCDNSTIVYLQHPCVILSALEVLGYKVVASSSTAVKQD 371
           RF CGG   N   V     CV  S       K +    T  K+D
Sbjct: 32  RFICGGSLINDRYVLTAAHCVFGSDRSRFSVKFLMHDRTVPKED 75


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 330 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 431
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 330 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 431
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 330 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 431
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,859
Number of Sequences: 2352
Number of extensions: 13384
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)