Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B13
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical ...    30   2.3  
AF024503-4|AAG24097.1|  330|Caenorhabditis elegans Serpentine re...    28   7.0  
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   9.3  
Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical pr...    28   9.3  
AC024089-3|ABC48260.1|  123|Caenorhabditis elegans Hypothetical ...    28   9.3  

>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical protein
            T20F7.5 protein.
          Length = 1065

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 212  ESGRYRRTQEICVRRLL*QFHNSLLTTSLRYTECFRSF 325
            E GR+R+T +IC+ R L    N   T  L++    R +
Sbjct: 974  EEGRFRKTHDICILRELEAIKNYNQTLDLKHARAVRQY 1011


>AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical
           protein Y48G1A.1 protein.
          Length = 901

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 252 GGYCDNSTIVYLQHPCVILSALEVL--GYKVVASSSTAVKQDYNEYMWTMRKEFSEPEP 422
           GGY    T+V +      ++A++V   G + +      +K D NE +W    +FS  +P
Sbjct: 179 GGYVALPTLVEIPKVTGYVAAVKVFDGGSQFLIGGKVYLKMDQNEILWDRTSDFSAEKP 237


>AF024503-4|AAG24097.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein245 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 20  SFFIVPLVNLYFVNKLF-I*TFIVQWKQIFFLSVTISVI 133
           +FFI+ L NL+  NKLF I     + +Q FF ++TI  +
Sbjct: 208 TFFILTLKNLFKENKLFNISRKTFEAQQTFFKAITIQFV 246


>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
            H06O01.2 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 309  SALEVLGYKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSIIVEQ-DNITNFSKEAMHLSN 485
            S LE L   +     T +++ YN Y+W    +F+  EP  + ++  +IT+   +  H  +
Sbjct: 1335 SFLENLETLIKKKPKTNIRKWYN-YLWIFLCKFTLREPGEMADRYRSITSDKHKNHHHHH 1393

Query: 486  YHSNKDDE 509
            +H +K+++
Sbjct: 1394 HHKSKEEK 1401


>Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical
           protein R10D12.8 protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 197 VSVWLESGRYRRTQEICVRRLL*QFHNSL 283
           + ++L  G+  +TQ+ C RR+L Q  N++
Sbjct: 361 IEIYLVHGKTSKTQKSCARRILNQVQNTI 389


>AC024089-3|ABC48260.1|  123|Caenorhabditis elegans Hypothetical
           protein C36E6.8 protein.
          Length = 123

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 264 DNSTIVYLQHPCVILSALEVLGYKVVASSSTA 359
           +N+T VY+Q PC +   L  LG   +A   TA
Sbjct: 69  ENTTTVYVQKPCTVQGCLVGLGPGEIAPFITA 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,074
Number of Sequences: 27780
Number of extensions: 331915
Number of successful extensions: 910
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)