Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B11
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.3  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 707 CCVMLIDLFYITHV 748
           C +++ +L+Y++HV
Sbjct: 258 CVIVIFELYYLSHV 271


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 236 FGIGFYIFVKALFGMCI 186
           FGI F +  + +F +C+
Sbjct: 880 FGISFLLVTQTIFALCV 896


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 207  FYENVEADTKLGLSFEIAEGGFLD 278
            FYE V A    G+   +A GG+ D
Sbjct: 1882 FYEKVTAYKSKGIKVLVAIGGWND 1905


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 236 FGIGFYIFVKALF 198
           FG+ FY F+   F
Sbjct: 235 FGVSFYFFISTFF 247


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 236 FGIGFYIFVKALF 198
           FG+ FY F+   F
Sbjct: 231 FGVSFYFFISTFF 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,579
Number of Sequences: 336
Number of extensions: 4135
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)