Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B11
(775 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 82 5e-16
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 73 3e-13
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 66 4e-11
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 65 5e-11
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 64 2e-10
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 63 2e-10
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 59 4e-09
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 38 0.009
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 36 0.027
07_03_0647 - 20253380-20253505,20253718-20253727,20253864-202539... 28 7.2
07_03_0642 - 20216944-20217069,20217282-20217291,20217428-202175... 28 7.2
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 81.8 bits (193), Expect = 5e-16
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Frame = +3
Query: 129 LVVTLLNLVSNAYSYTVTVDAHAEECFYENV--EADTKLGLSFEIAEGGFL------DID 284
+VV + A S TVT EC +E V E DT G +F + + ID
Sbjct: 12 VVVAVAAWRGEALSVTVT----DTECIHEFVPYEGDTVSG-NFVVVDHDIFWSSDHPGID 66
Query: 285 VIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTK 464
+ + P GN ++ + +S + F AP G Y +CF N + P+ V F + +G +
Sbjct: 67 LTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGA--PETVSFYIHVGHIPNE 124
Query: 465 SGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEAS 644
+ + + I EL L ++ +Q+Y++ R+ HR NEST RV+ ++I E
Sbjct: 125 HNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYL 184
Query: 645 VLLVMTIGQVYYLKRFF 695
+ + QV Y++R F
Sbjct: 185 AFMGASALQVVYIRRLF 201
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 72.5 bits (170), Expect = 3e-13
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Frame = +3
Query: 111 LRISQWLVVTLLNLVSNAYSYTVTVDAHAEECFYENV--EADTKLGLSFEIAEGG----F 272
LR+ LV+ +L + A + +D EECF NV E DT + +SF + + +
Sbjct: 5 LRLGFLLVLCILAFLRPAAAIRFVIDR--EECFSHNVDYEGDT-VHVSFVVIKAETPWHY 61
Query: 273 LD--IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEI 446
+ +D+++ P+GN IH + + S + F G + +CF+NK S + V F++ +
Sbjct: 62 TEDGVDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNK--SPYHETVDFDVLV 119
Query: 447 GEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMW 626
+ + + L + I +L L I+ +Q +++ + +NE+ + R V
Sbjct: 120 SHFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 179
Query: 627 SIFEASVLLVMTIGQVYYLKRFFE 698
+ FE++ L+ ++ QVY L R FE
Sbjct: 180 AFFESAALIAASVVQVYLLHRLFE 203
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 65.7 bits (153), Expect = 4e-11
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Frame = +3
Query: 216 NVEADTKLGLSFEIAEGGFLDIDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFS 395
NV L +E I V + P GN +H E + G + F+ AG Y CF
Sbjct: 51 NVVVLADYALMYESHPSSHPTIAVKVTSPYGNTLHHNENATVGQFAFTTSEAGNYLACFW 110
Query: 396 NKMSSMTPKVVMFNLEIGEPQTKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQ 566
S+ + NL+ + A K+E + +++L +++I + Y++
Sbjct: 111 ID-SAEKGSGISINLDWKIGIAAKDWDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLK 169
Query: 567 VRDRIHRSINESTNSRVVMWSIFEASVLLVMTIGQVYYLKRFFEVQRVV 713
R+ R+++E TN+RV +SI SV +V++I Q+++L+ +F+ ++++
Sbjct: 170 AREAEMRTVSEKTNARVAWFSILSLSVCIVVSILQLWHLQGYFQKKKLI 218
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 65.3 bits (152), Expect = 5e-11
Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +3
Query: 129 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEAD-TKLGLSFEIAEGGFL------DIDV 287
LV+ + L+ A + +D EECF NVE + + +SF + + +D+
Sbjct: 12 LVLCTVALLRPAAAIRFVIDR--EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDL 69
Query: 288 IILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKS 467
++ P+G + + ++S + F G + +CF+NK S + V F++ +G
Sbjct: 70 VVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK--SPYHETVDFDVHVGHFSYFD 127
Query: 468 GNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASV 647
+ + L + I +L L I+ +Q +++ + +NE+ + R V ++ E++
Sbjct: 128 QHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKALLESAA 187
Query: 648 LLVMTIGQVYYLKRFFE 698
L+ ++ QVY L+R FE
Sbjct: 188 LIAASVIQVYLLRRLFE 204
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 63.7 bits (148), Expect = 2e-10
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Frame = +3
Query: 279 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVM-FNLEIG-- 449
+ + + P GN +H +E SG + F+A AG Y CF T V F+ G
Sbjct: 86 VSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWAPDHRPTATVGFEFDWRSGVS 145
Query: 450 -EPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMW 626
T + + D ++E +K+L T+ +I + Y++ R+ + +N TNSR+
Sbjct: 146 ARDWTNVAKKGQVDMMEVE--LKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMAWL 203
Query: 627 SIFEASVLLVMTIGQVYYLKRFFEVQRVV 713
F ++ L + Q+++LK FFE ++++
Sbjct: 204 GFFSLAICLSVAGLQLWHLKNFFERKKLL 232
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Frame = +3
Query: 279 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQ 458
I + + P GN +H AE SG + F+A AG Y CF P + F +
Sbjct: 84 ISLRVTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFWAP-DHKPPVSIGFEFDWRSGV 142
Query: 459 TKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWS 629
N A +++ M +K+L T+++I + Y++ R+ +++N+ TNSR+
Sbjct: 143 AAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLG 202
Query: 630 IFEASVLLVMTIGQVYYLKRFFEVQRVV 713
+ L + Q+++LK FFE ++++
Sbjct: 203 FLSLGICLSVAGLQLWHLKTFFERKKLL 230
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/144 (23%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = +3
Query: 291 ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 470
+ P G+++H ++ S+G ++F+ AG Y CFS + VV NL+
Sbjct: 120 VTSPFGDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKR-LVVKLNLDWRVGIATKD 178
Query: 471 NENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEA 641
++ A KLE + + +L T+++ I + ++ ++ R +E TN+R SI
Sbjct: 179 WDSVAKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISL 238
Query: 642 SVLLVMTIGQVYYLKRFFEVQRVV 713
V +++++ Q+++L+++F ++++
Sbjct: 239 IVCIIVSVLQLWHLQQYFRKKKLI 262
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Frame = +3
Query: 129 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGF-----LDIDVI- 290
L + L LV++ + + + A +CF E ++++ + ++I G+ L I VI
Sbjct: 8 LALALWCLVADGEAVWMELSTTATKCFSERIQSNVVVIGDYDILFDGYPTRPILSIQVIL 67
Query: 291 -----ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFS 395
+ P G V+H E+ G ++F+ G Y CFS
Sbjct: 68 GLLLQVTSPYGKVLHHREKVMQGQFSFNTAEPGVYLACFS 107
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +3
Query: 291 ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 470
+ P GN +H E ++G + F+ AG Y CF S V NL+
Sbjct: 99 VTSPYGNTVHHNENATTGQFAFTTSEAGNYLACFWLD-SPEKGSGVSLNLDWKIGIAAKD 157
Query: 471 NENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSI 593
+ A K+E + +++L + +I H+ Y++ R+ R++
Sbjct: 158 WDTVAKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMRTL 201
>07_03_0647 -
20253380-20253505,20253718-20253727,20253864-20253977,
20254063-20254382
Length = 189
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 372 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENE 482
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
>07_03_0642 -
20216944-20217069,20217282-20217291,20217428-20217541,
20217627-20217946
Length = 189
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 372 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENE 482
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,182,357
Number of Sequences: 37544
Number of extensions: 369287
Number of successful extensions: 769
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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