Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B11
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 7e-58
SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 9e-15
SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13) 67 1e-11
SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12) 28 7.3
SB_3082| Best HMM Match : ig (HMM E-Value=1.5e-17) 28 9.6
SB_3525| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_53257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 221 bits (539), Expect = 7e-58
Identities = 99/159 (62%), Positives = 128/159 (80%)
Frame = +3
Query: 237 LGLSFEIAEGGFLDIDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMT 416
+GL FE+AEGGFLDIDV I+GPD VI+ ERE+SG YTF+A G Y YCFSNKMS+MT
Sbjct: 1 MGLIFEVAEGGFLDIDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMT 60
Query: 417 PKVVMFNLEIGEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSIN 596
PKV+ F+++IGE + E+ A H+KL +M+ +L+ + +KH+QEYM+VR+RIHRSIN
Sbjct: 61 PKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSIN 120
Query: 597 ESTNSRVVMWSIFEASVLLVMTIGQVYYLKRFFEVQRVV 713
++TNSRVV WS FE+ VL+ MT+GQVYYLKRFFEV+RVV
Sbjct: 121 DNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFEVRRVV 159
>SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 77.8 bits (183), Expect = 9e-15
Identities = 42/151 (27%), Positives = 76/151 (50%)
Frame = +3
Query: 132 VVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDGN 311
V+ L ++ + T ++ +A +CFYE ++ D K L F++ GG D+DVI+ +
Sbjct: 13 VLALSCILVSCTELTFELEDNARQCFYEELKKDAKATLEFQVITGGNYDVDVILYDINEK 72
Query: 312 VIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENEADH 491
++ +++ +TF+ G Y +CFSN+ S+++ K V F+ + GE +T+ H
Sbjct: 73 ELYSVQKKQYDSHTFTVEQPGIYKFCFSNEFSTISHKTVYFDFQSGE-ETQLTKTMGNHH 131
Query: 492 NKLEDMIKELATTLRTIKHDQEYMQVRDRIH 584
L M T +K +Y Q R+H
Sbjct: 132 TALTQMETACVTIHENLKIAIDY-QTHHRLH 161
>SB_4813| Best HMM Match : EMP24_GP25L (HMM E-Value=3.9e-13)
Length = 348
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Frame = +3
Query: 273 LDIDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCF---SNKMSSMTPKVVMFNLE 443
+ + V + P+G +I S G +TF++ T G++ C S + S + +L+
Sbjct: 196 IGMHVEVKDPNGKIIMSKYYSSEGRFTFTSHTPGEHVICLHSNSTRWSLWAGGRLRIHLD 255
Query: 444 IGEPQTKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSR 614
I + + A +KL ++ I++L + I +Q Y + R+ R +ESTN R
Sbjct: 256 IQVGEHANDYAQIAAKDKLTELQLRIRQLLDQVEQISKEQNYQRFREERFRMTSESTNQR 315
Query: 615 VVMWSIFEASVLLVMTIGQVYYLKRFFEVQRVV 713
V+ W++ + +LL Q+ +LK FFE +++V
Sbjct: 316 VLWWALAQTVILLATGFWQMRHLKGFFEAKKLV 348
>SB_11345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 60.1 bits (139), Expect = 2e-09
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 27/202 (13%)
Frame = +3
Query: 171 YTVTVDAHAEECFYENVEADTKLGLSFEIA--------------------EGGFLDIDVI 290
+T VD +CFYE ++ + L + +++ EGG LDI
Sbjct: 35 FTFRVDPGKRDCFYETIKRNVTLDVEYQVCAYVYKRHYCGNGMFDNNLVIEGGDLDIGFT 94
Query: 291 ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEI---GEPQT 461
+ P G + + + ++ G+Y +CF N S++ K + +L + + Q
Sbjct: 95 LQAPSGKIAIEDGHRTDEAHSLVTEEEGEYEFCFDNTFSTVASKAIFADLGVDFEDDIQK 154
Query: 462 KSG--NEN-EAD-HNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWS 629
G +EN E D H++ ++ + L +H Q ++ + +S +SRV WS
Sbjct: 155 MIGIKDENLEEDLHDRFVRTLENVRVDLDKAEHIQNFISSAAARDFRLAKSKDSRVFWWS 214
Query: 630 IFEASVLLVMTIGQVYYLKRFF 695
+ ++ L+ + I QV +K FF
Sbjct: 215 LIQSVALIGVAIVQVNVVKHFF 236
>SB_17502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +3
Query: 597 ESTNSRVVMWSIFEASVLLVMTIGQVYYLKRFFEVQRVV 713
EST +R++ +F +L+++T GQ+ YL RFF ++++
Sbjct: 347 ESTGARILYLGVFLTMLLVMLTGGQLVYLHRFFAAKKLI 385
>SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 498 LEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIF 635
LED EL T+L+ I DQE + R+ +NE+ NS++ S F
Sbjct: 70 LEDFKYELHTSLQVIFCDQEMGEGAKRLQSYVNENDNSKIQNQSYF 115
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 474 ENEADHNKLEDMIKELATTLRTIKHDQEYMQVR 572
+N + +LE I ELA T+ T++ + E QVR
Sbjct: 1687 KNHEEEERLEAEIAELANTVETLRTELEQSQVR 1719
>SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12)
Length = 734
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 LNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDGNVIHK 323
L+++ + +S VD+ ++ F ++ D+ G + E + FLDI+ G D + + +
Sbjct: 508 LDVLDDRHSDMSDVDSDSKSDFGDD---DSAFGDNDEAVKNKFLDIERDRFGSDSSTVSE 564
Query: 324 AE-RESSGIYTFSAPTAGKYTYCF 392
E ++S+ + +AP + K +CF
Sbjct: 565 REFKQSAPVDGNTAPESNK-KHCF 587
>SB_3082| Best HMM Match : ig (HMM E-Value=1.5e-17)
Length = 332
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 240 GLSFEI--AEGGFLDIDVIILGPDGNVIHKAERESSGIYTFSAPT---AGKYTYCFSN 398
G SF + + G +++ I PDG+V+ SSGIYTFS T G YT +N
Sbjct: 248 GNSFTVQCSASGTAPLNIAIHKPDGSVL-----TSSGIYTFSPITRRDEGTYTCTVNN 300
>SB_3525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 272 ETTFCYFKR*SQFGIGFYIFVKALFGMCINCDC 174
E +C+FKR +G I K G+C+NC C
Sbjct: 15 EEMWCFFKR---YGRYIVISSKMCTGICLNCIC 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,376,408
Number of Sequences: 59808
Number of extensions: 470145
Number of successful extensions: 1234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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