Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B08
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 405 VYPWFPCWSP*SILQYWY 352
           V  +F CW+P  ++  WY
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 405 VYPWFPCWSP*SILQYWY 352
           V  +F CW+P  ++  WY
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   KHKLIKXKSVLTYIRGLLGW 63
           +H LI+ K+ + Y   + GW
Sbjct: 138 EHNLIRLKNCVIYFNRIFGW 157


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 189 YYDFKRFSFLGEKWKK 236
           YY+F++FS   + W+K
Sbjct: 26  YYNFEKFSLEHQLWQK 41


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 154 RVKQLKRTNFPDIMTSKDSVSWEKNGKNSKTVRYV 258
           R K L RTNFP+     +   +    +N K V+Y+
Sbjct: 24  RTKYL-RTNFPNFYNDFEVQRYTWKCENQKCVKYL 57


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -3

Query: 274 PPIVLAHNERFYYFFHFSPKKLNLLKS*YLGSLFFLTV 161
           P +V+A  ++  YF        + L + +  +L+FLT+
Sbjct: 204 PMLVIAEYKQLDYFDGSKVPACHTLANTFWSALYFLTI 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,019
Number of Sequences: 336
Number of extensions: 2676
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)