Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B08
         (597 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0153 - 32024787-32024892,32024997-32025079,32025159-320259...    29   2.8  
02_05_0274 - 27371048-27371203,27371750-27371779,27372018-273721...    29   3.7  
09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342...    28   6.5  
11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381...    27   8.6  

>03_06_0153 -
           32024787-32024892,32024997-32025079,32025159-32025978,
           32026122-32026327,32026887-32026975,32027132-32027192,
           32027297-32027416
          Length = 494

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +1

Query: 103 DRADDEYSSDEELPALKRVKQLKRTNFPDIMTSKDSVSWEKNGKNSKTVRYVPIQLEAGH 282
           DR+    SS+E+ P +  V    R   PD  T K    W+ NG  + T +Y   Q  + H
Sbjct: 383 DRSHSAKSSEEDRPIIGLVAAHWRDTEPDTFTPK---WWDGNGIPNSTNKYKEDQKVSWH 439

Query: 283 PSTSTPIE 306
              +TP E
Sbjct: 440 ---ATPFE 444


>02_05_0274 -
           27371048-27371203,27371750-27371779,27372018-27372194,
           27372598-27372677,27373464-27373505,27373632-27373788,
           27374028-27374074,27375205-27375445
          Length = 309

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +1

Query: 115 DEYSSDEELPALKRVKQLKR---TNFPDIMTSKDSVSWEKNGKNSKTVRYVPIQLEAGHP 285
           + YSS++  P+   V   KR   +  PDI  S D+V++EK G  S+T   V     + H 
Sbjct: 102 NSYSSEKSEPSDTEVSAKKRKICSETPDIENSGDAVTYEK-GDASETTGSVEKDSVSPHS 160

Query: 286 STSTPI 303
            T   +
Sbjct: 161 KTKAEL 166


>09_04_0489 -
           18031187-18031579,18032033-18034030,18034102-18034234,
           18035360-18036108
          Length = 1090

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 7   HKLIKXKSVLTYIRGLLGWVDENPT 81
           H+    K V TY+  LLG+V+  PT
Sbjct: 254 HQFATCKEVSTYLMSLLGYVEAKPT 278


>11_04_0438 -
           17737040-17737122,17737373-17737496,17737897-17738182,
           17738265-17738397,17738742-17738953,17739455-17739816,
           17739907-17739937,17744738-17745111
          Length = 534

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +1

Query: 55  LGWVDENPTLRTSFKRDRADDEYSSDE 135
           LGW+ E+P LRT+ ++   +  + +++
Sbjct: 497 LGWIKESPFLRTALRKSADEGNFGTND 523


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,942,931
Number of Sequences: 37544
Number of extensions: 275136
Number of successful extensions: 519
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)