Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_B08
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 28 4.4
U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical pr... 28 4.4
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z77657-4|CAB01148.2| 376|Caenorhabditis elegans Hypothetical pr... 28 5.8
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 5.8
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 166 LKRTNFPDIMTSKDSVSWEKNGKNSKTVRYVPIQLEAGHPSTSTPIEPVNQGSRIRNVPI 345
+K T D + VS + VR+VP +G P+ S PIE + G +I +
Sbjct: 175 VKATVPSDFAQLQPVVSRSPSNPRHHNVRFVP----SGKPNVSIPIEIIYDGLKIDEKLV 230
Query: 346 KYIPVLE 366
K +P +E
Sbjct: 231 KVLPEVE 237
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 429 INDWAHWCVYPWFPCWSP*SILQYWYVFNWYISD 328
I+ W+ + V+PWFP + Y W+ D
Sbjct: 107 IHTWSKYLVWPWFPVMLSSILATLAYCIMWWCGD 140
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 429 INDWAHWCVYPWFPCWSP*SILQYWYVFNWYISD 328
I+ W+ + V+PWFP + Y W+ D
Sbjct: 107 IHTWSKYLVWPWFPVMLSSILATLAYCIMWWCGD 140
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 429 INDWAHWCVYPWFPCWSP*SILQYWYVFNWYISD 328
I+ W+ + V+PWFP + Y W+ D
Sbjct: 101 IHTWSKYLVWPWFPVMLSSILATLAYCIMWWCGD 134
>U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical
protein R02E12.2b protein.
Length = 377
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 88 TSFKRDRADDEYSSDEELPALKRVKQLK 171
+ F DR DDE +DE+ +K+++++K
Sbjct: 320 SEFHNDRTDDEQFNDEKAYLIKQIQEMK 347
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 88 TSFKRDRADDEYSSDEELPALKRVKQLK 171
+ F DR DDE +DE+ +K+++++K
Sbjct: 579 SEFHNDRTDDEQFNDEKAYLIKQIQEMK 606
>Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical
protein Y53C12A.4 protein.
Length = 338
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 88 TSFKRDRADDEYSSDEELPALKRVKQLK 171
T+F DR +DE +DE+ +K++++L+
Sbjct: 310 TAFHNDRTNDEQFNDEKAYLIKQIQELR 337
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 79 TLRTSFKRDRADDEYSSDEELPALKRVKQLKRTNFPDIMTSKDSVSWEKNGKNSKTVRYV 258
T +TS ++ R+D+ S+ EEL ++ KQ +I+ + +S KNG + + +
Sbjct: 354 TEKTSARKKRSDERMSALEELE--QQNKQKIDAKRAEIIRLRHEISELKNGNLTSSQTSL 411
Query: 259 PIQLEAGHPSTST 297
+ E H ST
Sbjct: 412 AMYNENNHSQNST 424
>Z77657-4|CAB01148.2| 376|Caenorhabditis elegans Hypothetical
protein F08H9.6 protein.
Length = 376
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 117 IVGPVAFETCPKGWIFINPTKKTAY 43
I+G A CP GWIF NP+ Y
Sbjct: 12 IIGLSAASECPSGWIF-NPSTTECY 35
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 70 ENPTLRTSFKR-DRADDEYSSDEELPALKRVKQLKR 174
E P+ TS R DR DD EELP R+ + R
Sbjct: 1387 EEPSKSTSSSRKDRKDDRKEKKEELPKASRIAEPAR 1422
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 223 KNGKNSKTVRYVPIQLEAGHPSTSTPIEPVNQG 321
K G N+ TVR +PI AGH T P G
Sbjct: 126 KTGSNT-TVRALPIHTSAGHAVTQKPSSTTTTG 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,146,574
Number of Sequences: 27780
Number of extensions: 249388
Number of successful extensions: 583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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