Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B05
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 283 ISELGHAYSISFKLLAVSWLYPWQW*AVCSSGQGQMK 173
           ++ +G     +FK L + W YP  W + C  G    K
Sbjct: 738 VAVVGFLRRHNFKGLHLDWNYPVCWQSNCKKGASSDK 774


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 174 FICPCPDEHTAHHCQ 218
           + C CP +HT  +C+
Sbjct: 439 YACYCPPKHTGKNCE 453


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 570 YNHIKIHLMKQKKLSLFYC 514
           +NH K+H+ + K+L+   C
Sbjct: 218 WNHSKVHIREDKRLTCPKC 236


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 117 LKLCTQLNNTLKVSVIFLLIT 55
           L +C Q  NT++ S IF L+T
Sbjct: 284 LYICNQCYNTVEESRIFGLVT 304


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 294 CHSSSLNSDMRIVYHSN 244
           CH  SL+SD + + H N
Sbjct: 334 CHPLSLSSDHQAMLHHN 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,510
Number of Sequences: 336
Number of extensions: 4012
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)