Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_B05
         (818 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016018-1|AAH16018.1|  278|Homo sapiens ACMSD protein protein.        30   8.8  
AC016725-1|AAY14997.1|  278|Homo sapiens unknown protein.              30   8.8  

>BC016018-1|AAH16018.1|  278|Homo sapiens ACMSD protein protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 171 IQAFRLVNWPNTSK*Q*TLKLCTQLNNTLKVSVI 70
           IQ F L  W   +K + TL LC  LNN L  +V+
Sbjct: 14  IQKFVLEKWTKKAKPEDTLNLCQLLNNDLASTVV 47


>AC016725-1|AAY14997.1|  278|Homo sapiens unknown protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 171 IQAFRLVNWPNTSK*Q*TLKLCTQLNNTLKVSVI 70
           IQ F L  W   +K + TL LC  LNN L  +V+
Sbjct: 14  IQKFVLEKWTKKAKPEDTLNLCQLLNNDLASTVV 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,533,046
Number of Sequences: 237096
Number of extensions: 2186861
Number of successful extensions: 2643
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2643
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)